RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 P3H1Q32P28 736 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 PCNX4Q63HM2 1172 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 KRT39Q6A163 491 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 B3GNT9Q6UX72 402 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 ENOSF1Q7L5Y1 443 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 HERC6Q8IVU3 1022 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 MCOLN2Q8IZK6 566 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 ZNF276Q8N554 614 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 DRAXINQ8NBI3 349 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-205ENST00000469550 EXD1Q8NHP7 514 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 PLEKHO2Q8TD55 490 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 NRG4Q8WWG1 115 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
HDAC3-205ENST00000469550 RMDN3Q96TC7 470 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 OSBPL8Q9BZF1 889 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-205ENST00000469550 HSPBP1Q9NZL4 362 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 PSMC3IPQ9P2W1 217 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-205ENST00000469550 KCNG1Q9UIX4 513 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 MTO1Q9Y2Z2 717 aaKnown RBP10.03□□□□□ -0.8
HDAC3-205ENST00000469550 EYSQ5T1H1 3165 aa10.03□□□□□ -0.8
HDAC3-205ENST00000469550 LOXHD1Q8IVV2 1947 aa10.02□□□□□ -0.8
HDAC3-205ENST00000469550 EIF4E1BA6NMX2 242 aaKnown RBP10.02□□□□□ -0.81
HDAC3-205ENST00000469550 F8W8V4 182 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 K7ENM7 598 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PDLIM1O00151 329 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 HAS3O00219 553 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 ZBTB39O15060 712 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 MAP3K13O43283 966 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 GAS7O60861 476 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 HAUS5O94927 633 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 CXCL10P02778 98 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 GTF2H1P32780 548 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 VPS41P49754 854 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 CACNA2D1P54289 1103 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 ENPEPQ07075 957 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 CUL3Q13618 768 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 MORF4L2Q15014 288 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 ACSBG2Q5FVE4 666 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 EFHC2Q5JST6 749 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 RNF220Q5VTB9 566 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 DAB2IPQ5VWQ8 1189 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 RFWD3Q6PCD5 774 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 LVRNQ6Q4G3 990 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PRUNE1Q86TP1 453 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 ARHGAP24Q8N264 748 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.02□□□□□ -0.81
HDAC3-205ENST00000469550 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 UCMAQ8WVF2 138 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 NT5C1BQ96P26 610 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 CBWD1Q9BRT8 395 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 TRIM55Q9BYV6 548 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PCIF1Q9H4Z3 704 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PIDD1Q9HB75 910 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PXMP2Q9NR77 195 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 KANSL3Q9P2N6 904 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 GTF2IRD1Q9UHL9 959 aa10.02□□□□□ -0.81
HDAC3-205ENST00000469550 DRG1Q9Y295 367 aaKnown RBP10.02□□□□□ -0.81
HDAC3-205ENST00000469550 PRUNE2Q8WUY3 3088 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 POC1B-GALNT4F8VUJ3 575 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 CAPN9O14815 690 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 GYG2O15488 501 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 MAP3K7O43318 606 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 TBX10O75333 385 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 RNF8O76064 485 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 F2P00734 622 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 CA3P07451 260 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 SELPP16109 830 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 CETN2P41208 172 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 RAP1GDS1P52306 607 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 GTF2BQ00403 316 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 TAP1Q03518 808 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 LAMC2Q13753 1193 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 GPNMBQ14956 572 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 LLGL1Q15334 1064 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 DGKDQ16760 1214 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-205ENST00000469550 CENPUQ71F23 418 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 SDCCAG8Q86SQ7 713 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-205ENST00000469550 C4orf33Q8N1A6 199 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 PPTC7Q8NI37 304 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-205ENST00000469550 NCSTNQ92542 709 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 DHX38Q92620 1227 aaKnown RBP10.01□□□□□ -0.81
HDAC3-205ENST00000469550 SEMA4DQ92854 862 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 PTPRN2Q92932 1015 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 SKA1Q96BD8 255 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 GORASP1Q9BQQ3 440 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 DHRS4Q9BTZ2 278 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 KATNAL1Q9BW62 490 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 TMEM8AQ9HCN3 771 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 NPHS2Q9NP85 383 aa10.01□□□□□ -0.81
HDAC3-205ENST00000469550 DMAP1Q9NPF5 467 aaPredicted RBP10.01□□□□□ -0.81
HDAC3-205ENST00000469550 ACP6Q9NPH0 428 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms