RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 TM9SF1O15321 606 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SORBS2O94875 1100 aaKnown RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 ATG7O95352 703 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 VHLP40337 213 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 GRIA1P42261 906 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 TMPRSS15P98073 1019 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 LRRC36Q1X8D7 754 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 TMEM132AQ24JP5 1023 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 MROH9Q5TGP6 573 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 EEF1DP3Q658K8 133 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 RBM15BQ8NDT2 890 aaKnown RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 SLC44A1Q8WWI5 657 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 STOML1Q9UBI4 398 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 WDR81Q562E7 1941 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 COPEO14579 308 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 PPP1R12AO14974 1030 aaPredicted RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 APRTP07741 180 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 DHRS4L1P0CG22 281 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 ZCCHC18P0CG32 403 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 GNAT1P11488 350 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 MRPS5P82675 430 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 CHI3L2Q15782 390 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 XYLT1Q86Y38 959 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 MPP5Q8N3R9 675 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 TEX9Q8N6V9 391 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 FBXO41Q8TF61 875 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 PGLYRP2Q96PD5 576 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 TTC1Q99614 292 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 KRT82Q9NSB4 513 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 PCMTD2Q9NV79 361 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 KCNN4O15554 427 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 ADCY3O60266 1144 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 MSCO60682 206 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 BAG2O95816 211 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 LDHAP00338 332 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 CXCL8P10145 99 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 RGS7P49802 495 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 DUOXA2Q1HG44 320 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 FAM102AQ5T9C2 384 aaPredicted RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 PCGF5Q86SE9 256 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 REPS2Q8NFH8 660 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 TEKT4Q8WW24 435 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 USP6NLQ92738 828 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 THTPAQ9BU02 230 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 IQCGQ9H095 443 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 MAFBQ9Y5Q3 323 aaPredicted RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 TEX264Q9Y6I9 313 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 SMAPO00193 183 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 LSM8O95777 96 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 RARBP10826 455 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 ACADSP16219 412 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 EIF4BP23588 611 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 AQP5P55064 265 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 ROR1Q01973 937 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 HADHQ16836 314 aaKnown RBP12.59□□□□□ -0.39
VARS2-205ENST00000469358 C16orf46Q6P387 395 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 STMN2Q93045 179 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 NLRP4Q96MN2 994 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 STRIP2Q9ULQ0 834 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 MAD1L1Q9Y6D9 718 aa12.59□□□□□ -0.39
VARS2-205ENST00000469358 IQANK1A0A1B0GTG1 560 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 LYPLA1O75608 230 aaPredicted RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 KRT7P08729 469 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 HOXC6P09630 235 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 CSH1P0DML2 217 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 CSH2P0DML3 217 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 RBL1P28749 1068 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 YWHAZP63104 245 aaKnown RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 CRADDP78560 199 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 SLC34A1Q06495 639 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 DLK2Q6UY11 383 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 WDR49Q8IV35 697 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 POU5F2Q8N7G0 328 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 NIPA2Q8N8Q9 360 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 IL1RAPL1Q9NZN1 696 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 CNTN3Q9P232 1028 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 H0YCG3 227 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 APOC4-APOC2K7ER74 178 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 M0QYV0 167 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 APOC2P02655 101 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 PTPN7P35236 360 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 BACE1P56817 501 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 PEX6Q13608 980 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 CA9Q16790 459 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 ISLR2Q6UXK2 745 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 SSU72Q9NP77 194 aaKnown RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 RNF19AQ9NV58 838 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 MTO1Q9Y2Z2 717 aaKnown RBP12.58□□□□□ -0.4
VARS2-205ENST00000469358 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
VARS2-205ENST00000469358 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms