RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 COL20A1Q9P218 1284 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 TCEAL9Q9UHQ7 104 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 PPM1HQ9ULR3 514 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 TTLL13PA6NNM8 815 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 TNNI1P19237 187 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 SERPINB9P50453 376 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 GAD2Q05329 585 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 DOK7Q18PE1 504 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 ZFYVE27Q5T4F4 411 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 RASSF3Q86WH2 238 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 ACTRT2Q8TDY3 377 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 DGCR14Q96DF8 476 aaKnown RBP16.2■□□□□ 0.18
CHD1L-205ENST00000467213 AGTPBP1Q9UPW5 1226 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 TTLL3Q9Y4R7 772 aa16.2■□□□□ 0.18
CHD1L-205ENST00000467213 SCN9AQ15858 1988 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 CST8O60676 142 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 RFPL1O75677 317 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 BPGMP07738 259 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 POLR2BP30876 1174 aaKnown RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 L1CAMP32004 1257 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 CC2D2BQ6DHV5 1058 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 IL31RAQ8NI17 732 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 UBE2OQ9C0C9 1292 aaKnown RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 C12orf65Q9H3J6 166 aaKnown RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 EBF3Q9H4W6 596 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 PSME4Q14997 1843 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 KBTBD13C9JR72 458 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 TBC1D12O60347 775 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 KRT38O76015 456 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 ENDOD1O94919 500 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 ZCCHC18P0CG32 403 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 ALOX15P16050 662 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 MRPS5P82675 430 aaKnown RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 TMPRSS15P98073 1019 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 TXNRD3NBQ6F5E7 133 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 MARVELD2Q8N4S9 558 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 ATP6V0A1Q93050 837 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 MAML3Q96JK9 1138 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 KLF6Q99612 283 aaPredicted RBP16.19■□□□□ 0.18
CHD1L-205ENST00000467213 ZBTB21Q9ULJ3 1066 aa16.19■□□□□ 0.18
CHD1L-205ENST00000467213 DOCK5Q9H7D0 1870 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 A0A0B4J269 797 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 TCRBV7S3A2A0A539 114 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 G3V3G9 751 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 MCF2LO15068 1137 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 CCNE2O96020 404 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 TUBB3Q13509 450 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 ANKRD20A4Q4UJ75 823 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 RABGAP1LQ5R372 815 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 ARID3BQ8IVW6 561 aaPredicted RBP16.18■□□□□ 0.18
CHD1L-205ENST00000467213 CCDC33Q8N5R6 958 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 ACER1Q8TDN7 264 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 ACMSDQ8TDX5 336 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 KIFC3Q9BVG8 833 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.185e-6■□□□□ 10
CHD1L-205ENST00000467213 ALG13Q9NP73 1137 aaKnown RBP16.18■□□□□ 0.18
CHD1L-205ENST00000467213 CHMP2BQ9UQN3 213 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 NUB1Q9Y5A7 615 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 PCDHA10Q9Y5I2 948 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 TRIM49D1C9J1S8 452 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 VAV1P15498 845 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 VCLP18206 1134 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 LIG4P49917 911 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 CHN2P52757 468 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
CHD1L-205ENST00000467213 NUDCD3Q8IVD9 361 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 UNC45BQ8IWX7 931 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 MCUQ8NE86 351 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 FBXO27Q8NI29 283 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 ACAP3Q96P50 834 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 PAK5Q9P286 719 aa16.18■□□□□ 0.18
CHD1L-205ENST00000467213 TMCC1O94876 653 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 ASS1P00966 412 aaKnown RBP16.17■□□□□ 0.18
CHD1L-205ENST00000467213 ASLP04424 464 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 AQP5P55064 265 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 NOMO1Q15155 1222 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 BORAQ6PGQ7 559 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 UGT2A3Q6UWM9 527 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 CDHR3Q6ZTQ4 885 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 RAPH1Q70E73 1250 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 WDR75Q8IWA0 830 aaKnown RBP16.17■□□□□ 0.18
CHD1L-205ENST00000467213 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
CHD1L-205ENST00000467213 TTC1Q99614 292 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 CYP26B1Q9NR63 512 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 DNAJC28Q9NX36 388 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 CNTNAP2Q9UHC6 1331 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 LRCH4O75427 683 aa16.17■□□□□ 0.18
CHD1L-205ENST00000467213 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
CHD1L-205ENST00000467213 EIF3EP60228 445 aaKnown RBP16.17■□□□□ 0.18
CHD1L-205ENST00000467213 MSLNQ13421 630 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms