RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 LRRC32Q14392 662 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 FIGNQ5HY92 759 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 SPOPLQ6IQ16 392 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 ACOT1Q86TX2 421 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 RALGPS2Q86X27 583 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-207ENST00000466829 ARL14EPQ8N8R7 260 aaPredicted RBP16.97■□□□□ 0.31
COL16A1-207ENST00000466829 CCDC112Q8NEF3 446 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 C8orf48Q96LL4 319 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 EBF3Q9H4W6 596 aa16.97■□□□□ 0.31
COL16A1-207ENST00000466829 C2orf78A6NCI8 922 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 SHISA7A6NL88 538 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 ESPNB1AK53 854 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 AKR1B15C9JRZ8 316 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-207ENST00000466829 CTHP32929 405 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 NDST1P52848 882 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 USP46P62068 366 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 ENPEPQ07075 957 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 ORC1Q13415 861 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 PPP2R5DQ14738 602 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 PON2Q15165 354 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 TRIM68Q6AZZ1 485 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.31
COL16A1-207ENST00000466829 SLITRK1Q96PX8 696 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 EDEM3Q9BZQ6 932 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 DNAI2Q9GZS0 605 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 KCNF1Q9H3M0 494 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 FBXO4Q9UKT5 387 aa16.96■□□□□ 0.31
COL16A1-207ENST00000466829 STX10O60499 249 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 ASS1P00966 412 aaKnown RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 AFPP02771 609 aaKnown RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 MSNP26038 577 aaKnown RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 PPP3CCP48454 512 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 IFNAR2P48551 515 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 CACNA2D1P54289 1103 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 NOP14P78316 857 aaKnown RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 AMPD2Q01433 879 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 PPP3CAQ08209 521 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 FZD5Q13467 585 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 RUNX3Q13761 415 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF268Q14587 947 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 MTF1Q14872 753 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 SYCP1Q15431 976 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 C1orf220Q5T0J3 134 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 TCERG1LQ5VWI1 586 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 TSSK4Q6SA08 328 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 FAM35AQ86V20 835 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 CNGA4Q8IV77 575 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 MAML2Q8IZL2 1156 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 NUP93Q8N1F7 819 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 TAS1R2Q8TE23 839 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 SH3RF2Q8TEC5 729 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 PANX2Q96RD6 677 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 SLC22A12Q96S37 553 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 HINFPQ9BQA5 517 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 CHRDQ9H2X0 955 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 SEMA4AQ9H3S1 761 aa16.95■□□□□ 0.3
COL16A1-207ENST00000466829 RBM12Q9NTZ6 932 aaKnown RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 DUS2Q9NX74 493 aaKnown RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
COL16A1-207ENST00000466829 AP1G2O75843 785 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 RTN3O95197 1032 aaPredicted RBP16.94■□□□□ 0.3
COL16A1-207ENST00000466829 LMNAP02545 664 aaKnown RBP16.94■□□□□ 0.3
COL16A1-207ENST00000466829 CHRNB1P11230 501 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 ARSAP15289 507 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 CD58P19256 250 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 YWHAQP27348 245 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 TAF10Q12962 218 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 PDGFRLQ15198 375 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF528Q3MIS6 628 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 DCAF17Q5H9S7 520 aaPredicted RBP16.94■□□□□ 0.3
COL16A1-207ENST00000466829 TXNDC11Q6PKC3 985 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 TC2NQ8N9U0 490 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 FBXO32Q969P5 355 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 SMARCD1Q96GM5 515 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 KCNK16Q96T55 309 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 FAM83CQ9BQN1 747 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 TMEM8AQ9HCN3 771 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 DMAP1Q9NPF5 467 aaPredicted RBP16.94■□□□□ 0.3
COL16A1-207ENST00000466829 KRT82Q9NSB4 513 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 FAM49BQ9NUQ9 324 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
COL16A1-207ENST00000466829 CAPN11Q9UMQ6 739 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
COL16A1-207ENST00000466829 A0A1W2PQJ5 194 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 GTPBP10A4D1E9 387 aaKnown RBP16.93■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF840PA6NDX5 716 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 GYPCP04921 128 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 CCDC130P13994 396 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 GTF2H1P32780 548 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 ASPAP45381 313 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 CCR3P51677 355 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 GRSF1Q12849 480 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL16A1-207ENST00000466829 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 WDR44Q5JSH3 913 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 DGKKQ5KSL6 1271 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 KRT39Q6A163 491 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms