RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PHGDHO43175 533 aaKnown RBP6.24□□□□□ -1.41
SMC4-205ENST00000465563 ALDH1L1O75891 902 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 PRF1P14222 555 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 HOXD9P28356 352 aaPredicted RBP6.24□□□□□ -1.41
SMC4-205ENST00000465563 EPHA3P29320 983 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 CCKBRP32239 447 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 PIN1Q13526 163 aaPredicted RBP6.24□□□□□ -1.41
SMC4-205ENST00000465563 ANO6Q4KMQ2 910 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 DCAF12L1Q5VU92 463 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 LRGUKQ96M69 825 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 SIGLEC11Q96RL6 698 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 ACO2Q99798 780 aaKnown RBP6.24□□□□□ -1.41
SMC4-205ENST00000465563 SMURF2Q9HAU4 748 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 A1CFQ9NQ94 594 aaKnown RBP6.24□□□□□ -1.41
SMC4-205ENST00000465563 XPNPEP3Q9NQH7 507 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 ZNF180Q9UJW8 692 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 NOP58Q9Y2X3 529 aaKnown RBP6.24□□□□□ -1.41
SMC4-205ENST00000465563 CDY1Q9Y6F8 540 aa6.24□□□□□ -1.41
SMC4-205ENST00000465563 CACNA1IQ9P0X4 2223 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 LY6G6EA0A0G2JKS1 128 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 MARCH6O60337 910 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 CBSLP0DN79 551 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 APEHP13798 732 aaKnown RBP6.23□□□□□ -1.41
SMC4-205ENST00000465563 EN2P19622 333 aaPredicted RBP6.23□□□□□ -1.41
SMC4-205ENST00000465563 CBSP35520 551 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 DIO1P49895 249 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 MTHFSP49914 203 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 AGFG1P52594 562 aaKnown RBP6.23□□□□□ -1.41
SMC4-205ENST00000465563 LINC00205P59089 165 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 HTRA4P83105 476 aaPredicted RBP6.23□□□□□ -1.41
SMC4-205ENST00000465563 LARS2Q15031 903 aaKnown RBP6.23□□□□□ -1.41
SMC4-205ENST00000465563 INSCQ1MX18 579 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 B3GNT9Q6UX72 402 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 JPH3Q8WXH2 748 aaPredicted RBP6.23□□□□□ -1.41
SMC4-205ENST00000465563 WASF1Q92558 559 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 MAP4K1Q92918 833 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 CTHRC1Q96CG8 243 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 VCPIP1Q96JH7 1222 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 PPP1R9BQ96SB3 815 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 VN1R3Q9BXE9 311 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 TRIM5Q9C035 493 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 FER1L4A9Z1Z3 1794 aa6.23□□□□□ -1.41
SMC4-205ENST00000465563 RGS10O43665 173 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 SRGAP2O75044 1071 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 CREB1P16220 341 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 SCP2P22307 547 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 SLC7A1P30825 629 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 UQCRC1P31930 480 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 ZNF91Q05481 1191 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 TTF1Q15361 905 aaPredicted RBP6.22□□□□□ -1.41
SMC4-205ENST00000465563 TRIM71Q2Q1W2 868 aaKnown RBP6.22□□□□□ -1.41
SMC4-205ENST00000465563 KLHL22Q53GT1 634 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 AWAT1Q58HT5 328 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 RUSC1-AS1Q66K80 236 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 LIX1LQ8IVB5 337 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 LINC01465Q8N7H1 131 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 SPSB4Q96A44 273 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 TAAR9Q96RI9 348 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 BRIP1Q9BX63 1249 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 MGAT4CQ9UBM8 478 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 ZNF580Q9UK33 172 aa6.22□□□□□ -1.41
SMC4-205ENST00000465563 TMPRSS11DO60235 418 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 RASAL1O95294 804 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 TIRAPP58753 221 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 CACHD1Q5VU97 1274 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 ANO7Q6IWH7 933 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 ZDHHC24Q6UX98 284 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 RANBP10Q6VN20 620 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 DCDC5Q6ZRR9 648 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 MAFAQ8NHW3 353 aaPredicted RBP6.21□□□□□ -1.42
SMC4-205ENST00000465563 IL31RAQ8NI17 732 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 SUCLG2Q96I99 432 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 HS6ST2Q96MM7 605 aa6.21□□□□□ -1.42
SMC4-205ENST00000465563 FOXP1Q9H334 677 aaPredicted RBP6.21□□□□□ -1.42
SMC4-205ENST00000465563 TYW1Q9NV66 732 aaKnown RBP6.21□□□□□ -1.42
SMC4-205ENST00000465563 LOC102723971A0A1B0GUV8 181 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 FAM90A10PA6NDY2 464 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 SPRY2O43597 315 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 MCL1Q07820 350 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 TMTC4Q5T4D3 741 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 VSTM1Q6UX27 236 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 NPNTQ6UXI9 565 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 TPH2Q8IWU9 490 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 ZBTB34Q8NCN2 500 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 OR56A3Q8NH54 315 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 MAML1Q92585 1016 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 ATP6V0A4Q9HBG4 840 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 TRIM36Q9NQ86 728 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 GAR1Q9NY12 217 aaKnown RBP6.2□□□□□ -1.42
SMC4-205ENST00000465563 DNMT3BQ9UBC3 853 aaKnown RBP6.2□□□□□ -1.42
SMC4-205ENST00000465563 MAFFQ9ULX9 164 aa6.2□□□□□ -1.42
SMC4-205ENST00000465563 ZMYM2Q9UBW7 1377 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 CD3EAPO15446 510 aaKnown RBP6.19□□□□□ -1.42
SMC4-205ENST00000465563 CCP110O43303 1012 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 AKAP10O43572 662 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 TUSC2O75896 110 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 CCKARP32238 428 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 TIAL1Q01085 375 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMC4-205ENST00000465563 ID2Q02363 134 aa6.19□□□□□ -1.42
SMC4-205ENST00000465563 KCNB1Q14721 858 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms