RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 MON1AQ86VX9 555 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 NT5DC4Q86YG4 428 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 STKLD1Q8NE28 680 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 ZSWIM2Q8NEG5 633 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 BAHD1Q8TBE0 780 aaPredicted RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 HVCN1Q96D96 273 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 FAM213AQ9BRX8 229 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 PI4K2AQ9BTU6 479 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 STRA6Q9BX79 667 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 UPF2Q9HAU5 1272 aaKnown RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 PRDM16Q9HAZ2 1276 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 ZDHHC4Q9NPG8 344 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 TMLHEQ9NVH6 421 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 TBC1D7Q9P0N9 293 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 DNMT3LQ9UJW3 386 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 PCDHB5Q9Y5E4 795 aa10.43□□□□□ -0.74
USP39-212ENST00000465514 SPTAN1Q13813 2472 aaKnown RBP10.43□□□□□ -0.74
USP39-212ENST00000465514 PLK4O00444 970 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 TLX3O43711 291 aaPredicted RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 ADAM23O75077 832 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 HLA-EP13747 358 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 GAP43P17677 238 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 POLR2BP30876 1174 aaKnown RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 GPR15P49685 360 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 TFAMQ00059 246 aaKnown RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 TSPY1Q01534 308 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 FAM160A1Q05DH4 1040 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 MESP2Q0VG99 397 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 GAB4Q2WGN9 574 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 EOGTQ5NDL2 527 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 L1TD1Q5T7N2 865 aaKnown RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 RRAGBQ5VZM2 374 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 SV2BQ7L1I2 683 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 GPR155Q7Z3F1 870 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 TRIML1Q8N9V2 468 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 MRPS31Q92665 395 aaKnown RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 DNAJC19Q96DA6 116 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 SAAL1Q96ER3 474 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 ZNF560Q96MR9 790 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 CLIC6Q96NY7 704 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 ACCSQ96QU6 501 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 IL21RQ9HBE5 538 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 CALCOCO1Q9P1Z2 691 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 SEL1LQ9UBV2 794 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 FBXO2Q9UK22 296 aaPredicted RBP10.42□□□□□ -0.74
USP39-212ENST00000465514 AGAP1Q9UPQ3 857 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 EXOC7Q9UPT5 735 aa10.42□□□□□ -0.74
USP39-212ENST00000465514 BOD1L1Q8NFC6 3051 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 FLNCQ14315 2725 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 IGHV1OR15-9A0A0B4J2B8 117 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 TADA3O75528 432 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 WISP1O95388 367 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 GCNT3O95395 438 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 ITGB3P05106 788 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 CKMP06732 381 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 PNPLA4P41247 253 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 NFE2Q16621 373 aaPredicted RBP10.41□□□□□ -0.74
USP39-212ENST00000465514 CCDC157Q569K6 752 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 EMC10Q5UCC4 262 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 SDHAF4Q5VUM1 108 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 SCARA3Q6AZY7 606 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 BRSK2Q8IWQ3 736 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 PDCL2Q8N4E4 241 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 CACTINQ8WUQ7 758 aaKnown RBP10.41□□□□□ -0.74
USP39-212ENST00000465514 NXPE2Q96DL1 559 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 FAM84AQ96KN4 292 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 SLC22A12Q96S37 553 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 ACBD6Q9BR61 282 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 LINC00597Q9H2U6 94 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 TRPC7Q9HCX4 862 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 L1RE1Q9UN81 338 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 MAGED2Q9UNF1 606 aaPredicted RBP10.41□□□□□ -0.74
USP39-212ENST00000465514 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
USP39-212ENST00000465514 SRPRBQ9Y5M8 271 aaKnown RBP10.41□□□□□ -0.74
USP39-212ENST00000465514 GOLGA8IPA6NC78 632 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 GOLGA8JA6NMD2 632 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 ERVH48-1M5A8F1 160 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 RRP8O43159 456 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 HUS1O60921 280 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 NFATC1O95644 943 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 LDHAP00338 332 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 CSH1P0DML2 217 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 CSH2P0DML3 217 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 IDEP14735 1019 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 GABRG2P18507 467 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 PDCP20941 246 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 GARTP22102 1010 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 ACAT1P24752 427 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 CYP2F1P24903 491 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 TXLNAP40222 546 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 KIR2DL1P43626 348 aaPredicted RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 CASP5P51878 434 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 RPL10AP62906 217 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 SEMG2Q02383 582 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms