RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 OTUB2Q96DC9 234 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 C8orf48Q96LL4 319 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 MMS19Q96T76 1030 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 STRA6Q9BX79 667 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 MTMR12Q9C0I1 747 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 FAM124BQ9H5Z6 455 aaPredicted RBP15.43■□□□□ 0.06
SMC1A-204ENST00000463684 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 CRTAC1Q9NQ79 661 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 CALCOCO1Q9P1Z2 691 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 DEC1Q9P2X7 70 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 SIX4Q9UIU6 781 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 PCDHB13Q9Y5F0 798 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 MYO16Q9Y6X6 1858 aa15.43■□□□□ 0.06
SMC1A-204ENST00000463684 GOLGA8IPA6NC78 632 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 GOLGA8JA6NMD2 632 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 F8VP50 259 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 NDUFS2O75306 463 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 PPP1R37O75864 691 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 GCNT3O95395 438 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 BMP15O95972 392 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 OAS1P00973 400 aaKnown RBP15.42■□□□□ 0.06
SMC1A-204ENST00000463684 TNNC2P02585 160 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 HOXB2P14652 356 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 GAP43P17677 238 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 NTSR1P30989 418 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 COL28A1Q2UY09 1125 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 PLEKHG6Q3KR16 790 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 SOWAHCQ53LP3 525 aaPredicted RBP15.42■□□□□ 0.06
SMC1A-204ENST00000463684 C10orf76Q5T2E6 689 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 SYCP2LQ5T4T6 812 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 RGL4Q8IZJ4 473 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 TRIML1Q8N9V2 468 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 SPRYD3Q8NCJ5 442 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 MYCBPAPQ8TBZ2 947 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 KBTBD7Q8WVZ9 684 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 ADAMTS14Q8WXS8 1223 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 PCED1BQ96HM7 432 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 FAM84AQ96KN4 292 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 CAMK1GQ96NX5 476 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 SNX25Q9H3E2 840 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 TBC1D7Q9P0N9 293 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 SH3BP1Q9Y3L3 701 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 FREM2Q5SZK8 3169 aa15.42■□□□□ 0.06
SMC1A-204ENST00000463684 ASCC3Q8N3C0 2202 aaKnown RBP15.41■□□□□ 0.06
SMC1A-204ENST00000463684 IGHV1OR15-9A0A0B4J2B8 117 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 FTH1P19P0C7X4 201 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 GNSP15586 552 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 WARSP23381 471 aaKnown RBP15.41■□□□□ 0.06
SMC1A-204ENST00000463684 IFRD2Q12894 506 aaPredicted RBP15.41■□□□□ 0.06
SMC1A-204ENST00000463684 MDH1BQ5I0G3 518 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 LIMS2Q7Z4I7 341 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 SLC41A1Q8IVJ1 513 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 PHTF2Q8N3S3 785 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 HSPA12BQ96MM6 686 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 PCIF1Q9H4Z3 704 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 INTS13Q9NVM9 706 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 SUSD2Q9UGT4 822 aa15.41■□□□□ 0.06
SMC1A-204ENST00000463684 APOBEC2Q9Y235 224 aaKnown RBP15.41■□□□□ 0.06
SMC1A-204ENST00000463684 FASNP49327 2511 aaKnown RBP15.41■□□□□ 0.06
SMC1A-204ENST00000463684 EIF4E1BA6NMX2 242 aaKnown RBP15.4■□□□□ 0.06
SMC1A-204ENST00000463684 TULP3O75386 442 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 YWHAQP27348 245 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 GNL1P36915 607 aaPredicted RBP15.4■□□□□ 0.06
SMC1A-204ENST00000463684 WASP42768 502 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 SURF1Q15526 300 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 DUOXA2Q1HG44 320 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 ANO4Q32M45 955 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 CCNI2Q6ZMN8 369 aaPredicted RBP15.4■□□□□ 0.06
SMC1A-204ENST00000463684 NAXDQ8IW45 347 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 GPD1LQ8N335 351 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 PNPLA1Q8N8W4 532 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 TERB1Q8NA31 727 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 PDZD8Q8NEN9 1154 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 FOXJ1Q92949 421 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 SPHK2Q9NRA0 654 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 CCDC39Q9UFE4 941 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 CYP8B1Q9UNU6 501 aa15.4■□□□□ 0.06
SMC1A-204ENST00000463684 HOXC11O43248 304 aaPredicted RBP15.39■□□□□ 0.05
SMC1A-204ENST00000463684 PRPF6O94906 941 aaKnown RBP15.39■□□□□ 0.05
SMC1A-204ENST00000463684 RTN3O95197 1032 aaPredicted RBP15.39■□□□□ 0.05
SMC1A-204ENST00000463684 GRIN1Q05586 938 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 ALCAMQ13740 583 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 WDR45BQ5MNZ6 344 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 SV2BQ7L1I2 683 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 ETFBKMTQ8IXQ9 262 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 CHPFQ8IZ52 775 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 NUP93Q8N1F7 819 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 OR6B3Q8NGW1 331 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 HNRNPLLQ8WVV9 542 aaKnown RBP15.39■□□□□ 0.05
SMC1A-204ENST00000463684 OVCA2Q8WZ82 227 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 ZNF419Q96HQ0 510 aaPredicted RBP15.39■□□□□ 0.05
SMC1A-204ENST00000463684 CBWD1Q9BRT8 395 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 ZDHHC5Q9C0B5 715 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 ELOVL4Q9GZR5 314 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 STK17AQ9UEE5 414 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 STARD13Q9Y3M8 1113 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 ITPR1Q14643 2758 aa15.39■□□□□ 0.05
SMC1A-204ENST00000463684 PCNX2A6NKB5 2137 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 A0A1W2PQF6 199 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 ZNF233A6NK53 670 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms