RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 LMNAP02545 664 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 ANXA6P08133 673 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 CD19P15391 556 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 XBP1P17861 261 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 DDX6P26196 483 aaKnown RBP eCLIP3.64□□□□□ -1.83
VCL-203ENST00000461383 RBL1P28749 1068 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 NTSR1P30989 418 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 UQCRC1P31930 480 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 SELENOPP49908 381 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 VAV2P52735 878 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 SCAPQ12770 1279 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 EIF2B5Q13144 721 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 CSHL1Q14406 222 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 ICAM4Q14773 271 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 FBXO47Q5MNV8 452 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 WDR78Q5VTH9 848 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 B3GNTL1Q67FW5 361 aaPredicted RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 ABLIM2Q6H8Q1 611 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 TANGO2Q6ICL3 276 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 CLEC9AQ6UXN8 241 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 RRAGAQ7L523 313 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 RAB11FIP2Q7L804 512 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 MOGAT3Q86VF5 341 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 SLC44A2Q8IWA5 706 aaPredicted RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 ABRAQ8N0Z2 381 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 Q8NA96 180 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 CPEB3Q8NE35 698 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 STT3BQ8TCJ2 826 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 OTUD7AQ8TE49 926 aaPredicted RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 GOLGA1Q92805 767 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 BOD1Q96IK1 185 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 TRAPPC9Q96Q05 1148 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 C17orf80Q9BSJ5 609 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 TP63Q9H3D4 680 aaPredicted RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 ELAC1Q9H777 363 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 UNKLQ9H9P5 680 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 MLXIPQ9HAP2 919 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 PRDM16Q9HAZ2 1276 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 GLOD4Q9HC38 313 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 PARPBPQ9NWS1 579 aa3.64□□□□□ -1.83
VCL-203ENST00000461383 TESQ9UGI8 421 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 SRP68Q9UHB9 627 aaKnown RBP3.64□□□□□ -1.83
VCL-203ENST00000461383 AHRRA9YTQ3 701 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 K7ESM1 405 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 MUSKO15146 869 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 PPM1DO15297 605 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 EPB41L2O43491 1005 aaKnown RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 KRT38O76015 456 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ZFPL1O95159 310 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 NTSR2O95665 410 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ITGB3P05106 788 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 CSF1RP07333 972 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ARP10275 920 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 LAG3P18627 525 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 RXRAP19793 462 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 GATA3P23771 443 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ACRV1P26436 265 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 CNTFP26441 200 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 KLRK1P26718 216 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 CST5P28325 142 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 ADD2P35612 726 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 GSTM5P46439 218 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 TBX2Q13207 712 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 BTBD16Q32M84 506 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 TEDDM1Q5T9Z0 273 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 SP5Q6BEB4 398 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 TMED8Q6PL24 325 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 LVRNQ6Q4G3 990 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 RINLQ6ZS11 566 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 LRRC55Q6ZSA7 311 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 TMPRSS9Q7Z410 1059 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 IZUMO1Q8IYV9 350 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ZNF276Q8N554 614 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 TTC9BQ8N6N2 239 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 C11orf44Q8N8P7 122 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 NAXEQ8NCW5 288 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 TOR1AIP2Q8NFQ8 470 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 MBD3L2Q8NHZ7 208 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 SCAMP5Q8TAC9 235 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 HMGB4Q8WW32 186 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ATG4AQ8WYN0 398 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 CPT1BQ92523 772 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 PTCD3Q96EY7 689 aaKnown RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 ZDHHC12Q96GR4 267 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 MPP4Q96JB8 637 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 DPCDQ9BVM2 203 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 SSBP3Q9BWW4 388 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 PABPC3Q9H361 631 aaKnown RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 ZNF768Q9H5H4 540 aaKnown RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 RIC8AQ9NPQ8 531 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 PRDM8Q9NQV8 689 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 TBCCD1Q9NVR7 557 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 LPAR3Q9UBY5 353 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ZNF69Q9UC07 566 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 STEAP1Q9UHE8 339 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 ST6GALNAC2Q9UJ37 374 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 CCNL1Q9UK58 526 aaPredicted RBP3.63□□□□□ -1.83
VCL-203ENST00000461383 SNX14Q9Y5W7 946 aa3.63□□□□□ -1.83
VCL-203ENST00000461383 UNC119BA6NIH7 251 aa3.62□□□□□ -1.83
VCL-203ENST00000461383 EFCAB8A8MWE9 144 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms