RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 CILPO75339 1184 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 MBL2P11226 248 aaPredicted RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 HLA-EP13747 358 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 GRIK1P39086 918 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 LHX1P48742 406 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 CAMK2BQ13554 666 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 SLFN12LQ6IEE8 588 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 VSTM1Q6UX27 236 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 DTHD1Q6ZMT9 781 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 MARCH9Q86YJ5 346 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 ZNF843Q8N446 348 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 ZCCHC9Q8N567 271 aaKnown RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 TERB1Q8NA31 727 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 ENGASEQ8NFI3 743 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 IPO4Q8TEX9 1081 aaKnown RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 C8orf76Q96K31 380 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 FCRL3Q96P31 734 aaPredicted RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 RNF38Q9H0F5 515 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 MIR1-1HGQ9H1L0 117 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 TOR4AQ9NXH8 423 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 AGO2Q9UKV8 859 aaKnown RBP13.6□□□□□ -0.23
C9orf78-202ENST00000461349 NFE2L3Q9Y4A8 694 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 PCDHB6Q9Y5E3 794 aa13.6□□□□□ -0.23
C9orf78-202ENST00000461349 ZNF462Q96JM2 2506 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 E2F8A0AVK6 867 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 FAM149AA5PLN7 773 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 ZNF840PA6NDX5 716 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
C9orf78-202ENST00000461349 TULP3O75386 442 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 DKK1O94907 266 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 IL18RAPO95256 599 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 OLFM2O95897 454 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 PLA2G4BP0C869 781 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 CD6P30203 668 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
C9orf78-202ENST00000461349 SLC12A3P55017 1021 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 POU5F1Q01860 360 aaKnown RBP13.59□□□□□ -0.23
C9orf78-202ENST00000461349 ANO4Q32M45 955 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
C9orf78-202ENST00000461349 SLC39A4Q6P5W5 647 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 KIAA1324Q6UXG2 1013 aaKnown RBP13.59□□□□□ -0.23
C9orf78-202ENST00000461349 ADGRF2Q8IZF7 708 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 MMTAG2Q9BU76 263 aaKnown RBP13.59□□□□□ -0.23
C9orf78-202ENST00000461349 PRORYQ9H606 182 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 IL21RQ9HBE5 538 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 AGAP1Q9UPQ3 857 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 STARD13Q9Y3M8 1113 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 PCDHGB2Q9Y5G2 931 aa13.59□□□□□ -0.23
C9orf78-202ENST00000461349 TRAK2O60296 914 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 FAM13AO94988 1023 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 ITGB3P05106 788 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 NCAM1P13591 858 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 ITPKBP27987 946 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 PRPHP41219 470 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 USP46P62068 366 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 TFAMQ00059 246 aaKnown RBP13.58□□□□□ -0.24
C9orf78-202ENST00000461349 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.24
C9orf78-202ENST00000461349 CCDC142Q17RM4 750 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 HLA-BQ31612 363 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 CCDC157Q569K6 752 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 ETFBKMTQ8IXQ9 262 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 TOP6BLQ8N6T0 577 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 SCFD1Q8WVM8 642 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 REEP2Q9BRK0 252 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 FNDC3AQ9Y2H6 1198 aaKnown RBP13.58□□□□□ -0.24
C9orf78-202ENST00000461349 SH3BP1Q9Y3L3 701 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 MYO18BQ8IUG5 2567 aa13.58□□□□□ -0.24
C9orf78-202ENST00000461349 MYLKQ15746 1914 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 TEX51A0A1B0GUA7 166 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 CYSRT1A8MQ03 144 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 TRIM66O15016 1216 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 BCAT2O15382 392 aaPredicted RBP13.57□□□□□ -0.24
C9orf78-202ENST00000461349 HOXC11O43248 304 aaPredicted RBP13.57□□□□□ -0.24
C9orf78-202ENST00000461349 TNFSF14O43557 240 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 OAS1P00973 400 aaKnown RBP13.57□□□□□ -0.24
C9orf78-202ENST00000461349 BDNFP23560 247 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 EIF2S3P41091 472 aaKnown RBP13.57□□□□□ -0.24
C9orf78-202ENST00000461349 CYP27A1Q02318 531 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 CFHR1Q03591 330 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
C9orf78-202ENST00000461349 HYIQ5T013 277 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 EGFLAMQ63HQ2 1017 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 GRAMD4Q6IC98 578 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 FAM171BQ6P995 826 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 DBX2Q6ZNG2 339 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 LRRC52Q8N7C0 313 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 KRI1Q8N9T8 703 aaKnown RBP13.57□□□□□ -0.24
C9orf78-202ENST00000461349 CADM4Q8NFZ8 388 aa13.57□□□□□ -0.24
C9orf78-202ENST00000461349 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms