RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 PDZD8Q8NEN9 1154 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 MRPS31Q92665 395 aaKnown RBP11.7□□□□□ -0.54
APTX-209ENST00000460940 MRFAP1L1Q96HT8 127 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 SLITRK1Q96PX8 696 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 KCNK16Q96T55 309 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 STK33Q9BYT3 514 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 GANQ9H2C0 597 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 FBXO44Q9H4M3 255 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 IL37Q9NZH6 218 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-209ENST00000460940 DOCK8Q8NF50 2099 aa11.7□□□□□ -0.54
APTX-209ENST00000460940 A0A0C4DFX4 3053 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 PATJQ8NI35 1801 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 A0A1W2PQC6 194 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 FAM92AA1XBS5 289 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 ANHXE9PGG2 379 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 RNF225M0QZC1 329 aaPredicted RBP11.69□□□□□ -0.54
APTX-209ENST00000460940 SERPINC1P01008 464 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 TPM1P09493 284 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 PFKLP17858 780 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 YWHAQP27348 245 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 WEE1P30291 646 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 GNA15P30679 374 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 PDE6CP51160 858 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 BPIFB4P59827 614 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 HTR4Q13639 388 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 RAPGEF1Q13905 1077 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 TMEM150AQ86TG1 271 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 CCAR2Q8N163 923 aaKnown RBP11.69□□□□□ -0.54
APTX-209ENST00000460940 STKLD1Q8NE28 680 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 NEK11Q8NG66 645 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 TFAP2BQ92481 460 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 PCMTD1Q96MG8 357 aaPredicted RBP11.69□□□□□ -0.54
APTX-209ENST00000460940 SLITRK6Q9H5Y7 841 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 TASP1Q9H6P5 420 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 TRPV4Q9HBA0 871 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 FAM207AQ9NSI2 230 aaPredicted RBP11.69□□□□□ -0.54
APTX-209ENST00000460940 AJAP1Q9UKB5 411 aaPredicted RBP11.69□□□□□ -0.54
APTX-209ENST00000460940 VCANP13611 3396 aa11.69□□□□□ -0.54
APTX-209ENST00000460940 DOCK6Q96HP0 2047 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 HHLA1C9JL84 531 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 F8VZ95 297 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
APTX-209ENST00000460940 BEST1O76090 585 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 USP8P40818 1118 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 USP46P62068 366 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 DRAP1Q14919 205 aaPredicted RBP11.68□□□□□ -0.54
APTX-209ENST00000460940 GPR158Q5T848 1215 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 TMCO3Q6UWJ1 677 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 TTC30AQ86WT1 665 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 EXOC4Q96A65 974 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
APTX-209ENST00000460940 CD320Q9NPF0 282 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 TRPM5Q9NZQ8 1165 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 C5orf42Q9H799 3197 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 M0QYV0 167 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 ECI2O75521 394 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 TADA3O75528 432 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 GJA1P17302 382 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 KLK7P49862 253 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 FANCCQ00597 558 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 PTK2Q05397 1052 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 PTPN21Q16825 1174 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 MON1AQ86VX9 555 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 ZSCAN18Q8TBC5 510 aaPredicted RBP11.68□□□□□ -0.54
APTX-209ENST00000460940 FBXO32Q969P5 355 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 MCRS1Q96EZ8 462 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 ASB16Q96NS5 453 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 LIMD1Q9UGP4 676 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.68□□□□□ -0.54
APTX-209ENST00000460940 SCML2Q9UQR0 700 aa11.68□□□□□ -0.54
APTX-209ENST00000460940 RRP15Q9Y3B9 282 aaKnown RBP11.68□□□□□ -0.54
APTX-209ENST00000460940 GREB1Q4ZG55 1949 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 TNFRSF10AO00220 468 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 FOXN3O00409 490 aaPredicted RBP11.67□□□□□ -0.54
APTX-209ENST00000460940 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
APTX-209ENST00000460940 THAP12O43422 761 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 IVLP07476 585 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 TUBP50607 506 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 KIF11P52732 1056 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 POLR2FP61218 127 aaKnown RBP11.67□□□□□ -0.54
APTX-209ENST00000460940 CYP4F8P98187 520 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 TAF10Q12962 218 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 FAM78AQ5JUQ0 283 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 PIGZQ86VD9 579 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 FMNL3Q8IVF7 1028 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 C10orf67Q8IYJ2 551 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 SCAMP5Q8TAC9 235 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 KCTD13Q8WZ19 329 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 ELSPBP1Q96BH3 223 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 ZSWIM1Q9BR11 485 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 KCNK12Q9HB15 430 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 SORCS3Q9UPU3 1222 aa11.67□□□□□ -0.54
APTX-209ENST00000460940 TRAV19A0A0A6YYK7 116 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms