RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FAM92AA1XBS5 289 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 TNFRSF10BO14763 440 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 AP1G2O75843 785 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 TRIM21P19474 475 aaKnown RBP24.15■■□□□ 1.46
PTPN4-207ENST00000460162 PXNP49023 591 aaPredicted RBP24.15■■□□□ 1.46
PTPN4-207ENST00000460162 VAMP7P51809 220 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 GAB4Q2WGN9 574 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 C1orf220Q5T0J3 134 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 SNX30Q5VWJ9 437 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 ACOT1Q86TX2 421 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 GUF1Q8N442 669 aaKnown RBP24.15■■□□□ 1.46
PTPN4-207ENST00000460162 ELMO3Q96BJ8 720 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 HHIPQ96QV1 700 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 RTKNQ9BST9 563 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 CFAP97Q9P2B7 532 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 HMGXB4Q9UGU5 601 aa24.15■■□□□ 1.46
PTPN4-207ENST00000460162 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.15■■□□□ 1.46
PTPN4-207ENST00000460162 MED19A0JLT2 244 aaPredicted RBP24.14■■□□□ 1.45
PTPN4-207ENST00000460162 HLA-DRAP01903 254 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 CCDC192P0DO97 292 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 EIF2DP41214 584 aaKnown RBP24.14■■□□□ 1.45
PTPN4-207ENST00000460162 NDST1P52848 882 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 DMC1Q14565 340 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 PRR23CQ6ZRP0 262 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 CACNA2D4Q7Z3S7 1137 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 CRYBG2Q8N1P7 616 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 NETO1Q8TDF5 533 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 LOXL4Q96JB6 756 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 CSNK1G1Q9HCP0 422 aa24.14■■□□□ 1.45
PTPN4-207ENST00000460162 AXIN1O15169 862 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 COCHO43405 550 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 APBB3O95704 486 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 ZDHHC11BP0C7U3 371 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 CCDC130P13994 396 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 RPL13P26373 211 aaKnown RBP24.13■■□□□ 1.45
PTPN4-207ENST00000460162 ATXN1P54253 815 aaKnown RBP24.13■■□□□ 1.45
PTPN4-207ENST00000460162 INCA1Q0VD86 236 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 DHCR24Q15392 516 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 HECTD3Q5T447 861 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 SPOPLQ6IQ16 392 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 SCAMP5Q8TAC9 235 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 SLC2A14Q8TDB8 520 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 CCDC34Q96HJ3 373 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 ZFRQ96KR1 1074 aaKnown RBP24.13■■□□□ 1.45
PTPN4-207ENST00000460162 DUSP9Q99956 384 aaKnown RBP24.13■■□□□ 1.45
PTPN4-207ENST00000460162 GOLPH3LQ9H4A5 285 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 TBC1D14Q9P2M4 693 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 NCOR2Q9Y618 2525 aa24.13■■□□□ 1.45
PTPN4-207ENST00000460162 E2F8A0AVK6 867 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 ADH1CP00326 375 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 KRT13P13646 458 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 ZCWPW2Q504Y3 356 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 FAM186BQ8IYM0 893 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 ADGRG2Q8IZP9 1017 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 ZMIZ2Q8NF64 920 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 OTUB2Q96DC9 234 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 SMOQ99835 787 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 FBXO44Q9H4M3 255 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 EBF1Q9UH73 591 aa24.12■■□□□ 1.45
PTPN4-207ENST00000460162 EPN2O95208 641 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 TRIM49P0CI25 452 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 TRIM49CP0CI26 452 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 PSMC2P35998 433 aaKnown RBP24.11■■□□□ 1.45
PTPN4-207ENST00000460162 ORC1Q13415 861 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 USP33Q8TEY7 942 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 NIF3L1Q9GZT8 377 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 CYP3A43Q9HB55 503 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 FAM49BQ9NUQ9 324 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 POLR3BQ9NW08 1133 aaPredicted RBP24.11■■□□□ 1.45
PTPN4-207ENST00000460162 GMIPQ9P107 970 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 MAPK8IP1Q9UQF2 711 aa24.11■■□□□ 1.45
PTPN4-207ENST00000460162 K7EQS6 105 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 SCAMP3O14828 347 aaKnown RBP24.1■■□□□ 1.45
PTPN4-207ENST00000460162 ZNF202O95125 648 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 FAM200BP0CF97 657 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 ADH5P11766 374 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 GCLMP48507 274 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 PPP3CAQ08209 521 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 EDRF1Q3B7T1 1238 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 KBTBD6Q86V97 674 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 TAS1R2Q8TE23 839 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 ZC3H10Q96K80 434 aaKnown RBP24.1■■□□□ 1.45
PTPN4-207ENST00000460162 CCSER2Q9H7U1 834 aa24.1■■□□□ 1.45
PTPN4-207ENST00000460162 CHORDC1Q9UHD1 332 aaPredicted RBP24.1■■□□□ 1.45
PTPN4-207ENST00000460162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.09■■□□□ 1.45
PTPN4-207ENST00000460162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.09■■□□□ 1.45
PTPN4-207ENST00000460162 BEST1O76090 585 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 MAP3K7CLP57077 242 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 RHBDF2Q6PJF5 856 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 C12orf29Q8N999 325 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 CCDC150Q8NCX0 1101 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 TSTD1Q8NFU3 115 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 HNRNPABQ99729 332 aaKnown RBP24.09■■□□□ 1.45
PTPN4-207ENST00000460162 NT5C1AQ9BXI3 368 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 NACA2Q9H009 215 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 TMEM8AQ9HCN3 771 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 PNPLA8Q9NP80 782 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 MMP17Q9ULZ9 603 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 SH3BP1Q9Y3L3 701 aa24.09■■□□□ 1.45
PTPN4-207ENST00000460162 PCDHGA5Q9Y5G8 931 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms