RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	GNA15	P30679	374 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	RPL34	P49207	117 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	GPC5	P78333	572 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ARHGAP15	Q53QZ3	475 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	SNX30	Q5VWJ9	437 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	E4F1	Q66K89	784 aa	Predicted RBP	10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	NOP9	Q86U38	636 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	GAS2L3	Q86XJ1	694 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	RNF214	Q8ND24	703 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ANKRD20A12P	Q8NF67	263 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	CLEC4C	Q8WTT0	213 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	BAP1	Q92560	729 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	MRPS31	Q92665	395 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	WBP2	Q969T9	261 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ELSPBP1	Q96BH3	223 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ASIC4	Q96FT7	647 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZFR	Q96KR1	1074 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	GCNA	Q96QF7	691 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	STK33	Q9BYT3	514 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ULBP1	Q9BZM6	244 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	UBXN6	Q9BZV1	441 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	TTYH3	Q9C0H2	523 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZFP14	Q9HCL3	533 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRPC7	Q9HCX4	862 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	COMMD8	Q9NX08	183 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRPM5	Q9NZQ8	1165 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	NOCT	Q9UK39	431 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	DUSP12	Q9UNI6	340 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	SCML2	Q9UQR0	700 aa		10.82	□□□□□ -0.68
MRPL55-223	ENST00000459783	COL4A2	P08572	1712 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783		A0A1W2PQH9	124 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	FAM170A	A1A519	330 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	FAM86C2P	A6NEL3	165 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	ARNTL	O00327	626 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	MDM4	O15151	490 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	COCH	O43405	550 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	CAVIN2	O95810	425 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	TBX18	O95935	607 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	PDGFB	P01127	241 aa	Predicted RBP	10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	TPM2	P07951	284 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	USP17L7	P0C7H9	530 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	CHRNB2	P17787	502 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	RFX1	P22670	979 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	DDX6	P26196	483 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	PLA2G5	P39877	138 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	TKTL1	P51854	596 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	ADIG	Q0VDE8	80 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	USP4	Q13107	963 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	PM20D1	Q6GTS8	502 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	HFE2	Q6ZVN8	426 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	MTSS1L	Q765P7	747 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	CCDC186	Q7Z3E2	898 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	PASD1	Q8IV76	773 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	EPS8L1	Q8TE68	723 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	SLC20A1	Q8WUM9	679 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	KCTD13	Q8WZ19	329 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	OVCA2	Q8WZ82	227 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	EDA	Q92838	391 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	NXPE3	Q969Y0	559 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	PIWIL1	Q96J94	861 aa	Known RBP	10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZFYVE19	Q96K21	471 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	FAM81B	Q96LP2	452 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	SLITRK1	Q96PX8	696 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	HESX1	Q9UBX0	185 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	NUDT5	Q9UKK9	219 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	PCDHGC3	Q9UN70	934 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	TECTA	O75443	2155 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	DENND4C	Q5VZ89	1909 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	ANAPC1	Q9H1A4	1944 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	MUC3A	Q02505	3323 aa		10.81	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZNF638	Q14966	1978 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRAV19	A0A0A6YYK7	116 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783		A0A1W2PQC6	194 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	KRBA1	A5PL33	1030 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	YJEFN3	A6XGL0	299 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SOBP	A7XYQ1	873 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783		E7ENQ6	273 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SCAMP3	O14828	347 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	GFPT2	O94808	682 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	ABL1	P00519	1130 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SERPINC1	P01008	464 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SRF	P11831	508 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	CYP11B1	P15538	503 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	HDC	P19113	662 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	TRIM21	P19474	475 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SOX5	P35711	763 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SLC7A9	P82251	487 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	FCHO2	Q0JRZ9	810 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	STIL	Q15468	1287 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	ZNF77	Q15935	545 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	MEA1	Q16626	185 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	TAF3	Q5VWG9	929 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SMYD5	Q6GMV2	418 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	MFSD6L	Q8IWD5	586 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	PDZD8	Q8NEN9	1154 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	NEK11	Q8NG66	645 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	SLC4A5	Q9BY07	1137 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	DNAI2	Q9GZS0	605 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	RBSN	Q9H1K0	784 aa		10.8	□□□□□ -0.68
MRPL55-223	ENST00000459783	FBXO44	Q9H4M3	255 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms