RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 INVSQ9Y283 1065 aa13.74□□□□□ -0.21
TREX1-203ENST00000456089 CPQQ9Y646 472 aa13.74□□□□□ -0.21
TREX1-203ENST00000456089 LAMA1P25391 3075 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 CEP192Q8TEP8 1941 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 ZNF840PA6NDX5 716 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 PSMA7O14818 248 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
TREX1-203ENST00000456089 VNN1O95497 513 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 STAU1O95793 577 aaKnown RBP13.73□□□□□ -0.21
TREX1-203ENST00000456089 C4BPAP04003 597 aaKnown RBP13.73□□□□□ -0.21
TREX1-203ENST00000456089 FAM163BP0C2L3 166 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 KCNA4P22459 653 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 HOXA6P31267 233 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 OPRD1P41143 372 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 PPP1R2P41236 205 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 PIK3CAP42336 1068 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 PRCPP42785 496 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 UBE2HP62256 183 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 CLDN10P78369 228 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 AMPD2Q01433 879 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 MESP2Q0VG99 397 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 SGSM1Q2NKQ1 1148 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 GAB4Q2WGN9 574 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 ISM2Q6H9L7 571 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 C8orf48Q96LL4 319 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 KCNK16Q96T55 309 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 MED10Q9BTT4 135 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 MMRN2Q9H8L6 949 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 RXFP3Q9NSD7 469 aa13.73□□□□□ -0.21
TREX1-203ENST00000456089 STX10O60499 249 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 ATG13O75143 517 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 AKAP3O75969 853 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 CYP17A1P05093 508 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 SLC6A11P48066 632 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
TREX1-203ENST00000456089 FKBP3Q00688 224 aaKnown RBP13.72□□□□□ -0.21
TREX1-203ENST00000456089 DMC1Q14565 340 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 CSRP2Q16527 193 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 C2orf27AQ580R0 203 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 PAQR9Q6ZVX9 377 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 SCAMP5Q8TAC9 235 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 TAF4BQ92750 862 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 RTKNQ9BST9 563 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 DNAI2Q9GZS0 605 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 ZDHHC4Q9NPG8 344 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 CFAP97Q9P2B7 532 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
TREX1-203ENST00000456089 CHORDC1Q9UHD1 332 aaPredicted RBP13.72□□□□□ -0.21
TREX1-203ENST00000456089 K7EQS6 105 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 LRP3O75074 770 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 NFATC1O95644 943 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 OAS1P00973 400 aaKnown RBP13.71□□□□□ -0.21
TREX1-203ENST00000456089 MBL2P11226 248 aaPredicted RBP13.71□□□□□ -0.21
TREX1-203ENST00000456089 CCDC130P13994 396 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 TCF3P15923 654 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 SDHBP21912 280 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 GCLMP48507 274 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 SLC7A9P82251 487 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 NR1H3Q13133 447 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 ZACNQ401N2 412 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 CACNA2D4Q7Z3S7 1137 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 ACOT1Q86TX2 421 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 FAM35AQ86V20 835 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 C12orf40Q86WS4 652 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 CCDC33Q8N5R6 958 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 SPATA20Q8TB22 786 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 NETO1Q8TDF5 533 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 FBXO32Q969P5 355 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 WBP2Q969T9 261 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 DHTKD1Q96HY7 919 aaPredicted RBP13.71□□□□□ -0.21
TREX1-203ENST00000456089 TPSD1Q9BZJ3 242 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
TREX1-203ENST00000456089 TNRC6BQ9UPQ9 1833 aaKnown RBP13.7□□□□□ -0.22
TREX1-203ENST00000456089 SLC30A4O14863 429 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 BEST1O76090 585 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 EPN2O95208 641 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 HLA-DRAP01903 254 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 TRIM49P0CI25 452 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 TRIM49CP0CI26 452 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 IRF1P10914 325 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 YWHAQP27348 245 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 GTF2H1P32780 548 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 PGFP49763 221 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 DGKEP52429 567 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 KDSRQ06136 332 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 ENPEPQ07075 957 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 FBXO43Q4G163 708 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 AASDHQ4L235 1098 aaPredicted RBP13.7□□□□□ -0.22
TREX1-203ENST00000456089 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
TREX1-203ENST00000456089 TCERG1LQ5VWI1 586 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 TCEAL6Q6IPX3 200 aa13.7□□□□□ -0.22
TREX1-203ENST00000456089 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms