RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ATXN3LQ9H3M9 355 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ASAH2Q9NR71 780 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 RBM12Q9NTZ6 932 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 DPP3Q9NY33 737 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 KCND2Q9NZV8 630 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 CPSF3Q9UKF6 684 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 AGO2Q9UKV8 859 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ODF2LQ9ULJ1 636 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 YIPF1Q9Y548 306 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 GREB1Q4ZG55 1949 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 OBSL1O75147 1896 aa5.07□□□□□ -1.6
GTF3C3-208ENST00000455546 EML5Q05BV3 1969 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 ANO9A1A5B4 782 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 MTMR11A4FU01 709 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SLC38A8A6NNN8 435 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 H0YCG3 227 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 NCAM2O15394 837 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 XPOTO43592 962 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 HCRTO43612 131 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 KINO60870 393 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 LILRB5O75023 590 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 PRPF6O94906 941 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 PIGRP01833 764 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 ESRRAP11474 423 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TYMPP19971 482 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 GABRR2P28476 465 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 GPR15P49685 360 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 LIG3P49916 1009 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 CASP5P51878 434 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 KPNA1P52294 538 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 ZNF131P52739 623 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 EPHB3P54753 998 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 EPHA5P54756 1037 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 CYP4F8P98187 520 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 DMWDQ09019 674 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TMEM132DQ14C87 1099 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 MGAT5BQ3V5L5 792 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 GPR158Q5T848 1215 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 RRAGBQ5VZM2 374 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SLFN12LQ6IEE8 588 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 ARMCX5Q6P1M9 558 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 BRAPQ7Z569 592 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TMC8Q8IU68 726 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 MFSD6LQ8IWD5 586 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 YAF2Q8IY57 180 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 EFCAB13Q8IY85 973 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 NOC3LQ8WTT2 800 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 POMGNT1Q8WZA1 660 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SAAL1Q96ER3 474 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 BORCS6Q96GS4 357 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SEPT5Q99719 369 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SLC46A2Q9BY10 475 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 FGFBP2Q9BYJ0 223 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 OSBPL6Q9BZF3 934 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 CCSER1Q9C0I3 900 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TGIF2Q9GZN2 237 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 ADAM19Q9H013 955 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SEMA4AQ9H3S1 761 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 PCIF1Q9H4Z3 704 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 MRPL44Q9H9J2 332 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 UPF2Q9HAU5 1272 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SRA1Q9HD15 236 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TMLHEQ9NVH6 421 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 C2orf42Q9NWW7 574 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 GTSE1Q9NYZ3 720 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 FBXO2Q9UK22 296 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 MRPS17Q9Y2R5 130 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 PIAS3Q9Y6X2 628 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 NUP210Q8TEM1 1887 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 DMDP11532 3685 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 TSC2P49815 1807 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 GVINP1Q7Z2Y8 2422 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 SPTBN2O15020 2390 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 VPS13AQ96RL7 3174 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 COL4A2P08572 1712 aa5.06□□□□□ -1.6
GTF3C3-208ENST00000455546 DCHS1Q96JQ0 3298 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 A0A087X0B3 334 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 MED19A0JLT2 244 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 OTOL1A6NHN0 477 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 OR6C75A6NL08 312 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 KPNA7A9QM74 516 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 H3BRJ5 948 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 ARNTLO00327 626 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 MAN2B1O00754 1011 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 SLC26A4O43511 780 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 GCNT3O95395 438 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 CHRNB1P11230 501 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 ODC1P11926 461 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 IDEP14735 1019 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 ATF6P18850 670 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 SYT1P21579 422 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 ACAT1P24752 427 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 RPS9P46781 194 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 MCM2P49736 904 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 TAF6P49848 677 aa5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 TFAMQ00059 246 aaKnown RBP5.05□□□□□ -1.6
GTF3C3-208ENST00000455546 SATB1Q01826 763 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms