RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 DHPSP49366 369 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CASP5P51878 434 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 SEC13P55735 322 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 WNT7BP56706 349 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 PSMC1P62191 440 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 DHCR24Q15392 516 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 NAIF1Q69YI7 327 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 UNQ6494/PRO21346Q6UXR6 183 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 SLC36A4Q6YBV0 504 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 USP49Q70CQ1 688 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 HS2ST1Q7LGA3 356 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 FILIP1Q7Z7B0 1213 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 TTC30AQ86WT1 665 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 SYT12Q8IV01 421 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ADGRG2Q8IZP9 1017 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CCDC33Q8N5R6 958 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 MDGA1Q8NFP4 955 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 OR6B3Q8NGW1 331 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 OLIG1Q8TAK6 271 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CEP76Q8TAP6 659 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 KBTBD7Q8WVZ9 684 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 PIGKQ92643 395 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 PCED1BQ96HM7 432 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 DUSP9Q99956 384 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 TPSD1Q9BZJ3 242 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CRTAC1Q9NQ79 661 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ARHGEF4Q9NR80 690 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 POLR3BQ9NW08 1133 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 COMMD8Q9NX08 183 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 HSPBP1Q9NZL4 362 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CGNQ9P2M7 1197 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CPQQ9Y646 472 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 GON4LQ3T8J9 2241 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CEP192Q8TEP8 1941 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 MYH10P35580 1976 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TNRC6BQ9UPQ9 1833 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 F8VP50 259 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 AP5Z1O43299 807 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 KLF8O95600 359 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 STAU1O95793 577 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 MBL2P11226 248 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 HOXB1P14653 301 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 PTPN1P18031 435 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TNNI1P19237 187 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 LMO2P25791 158 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 YWHAQP27348 245 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 P2RY2P41231 377 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TUBP50607 506 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 ATXN3P54252 364 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 GAD2Q05329 585 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 FOXC1Q12948 553 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TAF10Q12962 218 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TRPC3Q13507 836 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 CUL4AQ13619 759 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 HNRNPDQ14103 355 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 PSMD6Q15008 389 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 SLC39A14Q15043 492 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 SNRNP35Q16560 246 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TRIM61Q5EBN2 209 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 MDH1BQ5I0G3 518 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 HECTD3Q5T447 861 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 LYSMD4Q5XG99 296 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TRAPPC11Q7Z392 1133 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 CBWD2Q8IUF1 395 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 NUP93Q8N1F7 819 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TXNDC5Q8NBS9 432 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 ZSWIM2Q8NEG5 633 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 OR5B17Q8NGF7 314 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 TNIP3Q96KP6 325 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 CLIC6Q96NY7 704 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 NACA2Q9H009 215 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 ZSCAN16Q9H4T2 348 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 MAGEF1Q9HAY2 307 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 CFAP97Q9P2B7 532 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 SH3BP1Q9Y3L3 701 aa8.53□□□□□ -1.04
NIF3L1-209ENST00000454952 CEP295Q9C0D2 2601 aa8.52□□□□□ -1.04
NIF3L1-209ENST00000454952 A8MXQ7 604 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 UPK3BL1B0FP48 263 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 UPK3BL2E5RIL1 263 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 H0Y626 953 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 HOXC11O43248 304 aaPredicted RBP8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 HCRTO43612 131 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 PHACTR2O75167 634 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 TRIM16O95361 564 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 DLATP10515 647 aaKnown RBP8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 BCKDHBP21953 392 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 AP3M2P53677 418 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 USP46P62068 366 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 ASIC1P78348 528 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 IRX4P78413 519 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 GOLGA8FQ08AF8 430 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 GOLGA8DPQ0D2H9 430 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 CCDC142Q17RM4 750 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 GAB4Q2WGN9 574 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 UAP1L1Q3KQV9 507 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 WDR72Q3MJ13 1102 aa8.52□□□□□ -1.05
NIF3L1-209ENST00000454952 SDE2Q6IQ49 451 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms