RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RAB6CQ9H0N0 254 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 LZTS1Q9Y250 596 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 HYOU1Q9Y4L1 999 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 CEP83Q9Y592 693 aa11.57□□□□□ -0.56
SCN9A-205ENST00000454569 EYSQ5T1H1 3165 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 TGM5O43548 720 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 RB1P06400 928 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
SCN9A-205ENST00000454569 TKTL1P51854 596 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
SCN9A-205ENST00000454569 ZNF252P-AS1Q0IIN9 211 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 MAPRE1Q15691 268 aaKnown RBP11.56□□□□□ -0.56
SCN9A-205ENST00000454569 NFE2Q16621 373 aaPredicted RBP11.56□□□□□ -0.56
SCN9A-205ENST00000454569 PPP2R2DQ66LE6 453 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 C2orf16Q68DN1 1984 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 OR6B2Q6IFH4 312 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 OLFML1Q6UWY5 402 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 NYAP1Q6ZVC0 841 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 EMC1Q8N766 993 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 ZNF461Q8TAF7 563 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 GIPC2Q8TF65 315 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 CTNNBL1Q8WYA6 563 aaPredicted RBP11.56□□□□□ -0.56
SCN9A-205ENST00000454569 KCTD13Q8WZ19 329 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 WDR24Q96S15 920 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 ULBP1Q9BZM6 244 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 ENTPD7Q9NQZ7 604 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 TLR9Q9NR96 1032 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 RWDD3Q9Y3V2 267 aa11.56□□□□□ -0.56
SCN9A-205ENST00000454569 GRID2IPA4D2P6 1211 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 BTNL10A8MVZ5 291 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 PER2O15055 1255 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 LPXNO60711 386 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 ATF2P15336 505 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 TFE3P19532 575 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 NOP2P46087 812 aaKnown RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 IFRD2Q12894 506 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 ZNF268Q14587 947 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 RAB30Q15771 203 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 MGAT5BQ3V5L5 792 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 ARHGAP29Q52LW3 1261 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 LILRA6Q6PI73 481 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 MICAL1Q8TDZ2 1067 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 RFFLQ8WZ73 363 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 FUBP3Q96I24 572 aaKnown RBP eCLIP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 HSFY1Q96LI6 401 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 C16orf45Q96MC5 204 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 SEPT5Q99719 369 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 C11orf84Q9BUA3 381 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 SLC28A3Q9HAS3 691 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 DMAP1Q9NPF5 467 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 AVENQ9NQS1 362 aaPredicted RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 CTTNBP2NLQ9P2B4 639 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 AFF4Q9UHB7 1163 aaKnown RBP11.55□□□□□ -0.56
SCN9A-205ENST00000454569 TMEM59LQ9UK28 342 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 IRAK3Q9Y616 596 aa11.55□□□□□ -0.56
SCN9A-205ENST00000454569 ATP8B3O60423 1300 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 CARNS1A5YM72 827 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 TMEM191CA6NGB0 347 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 YJEFN3A6XGL0 299 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 E7ENQ6 273 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 KRT86O43790 486 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 CALB1P05937 261 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 FYNP06241 537 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 GTF2F1P35269 517 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 FLT3P36888 993 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 MAGEA11P43364 429 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 SLC5A3P53794 718 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 PITX1P78337 314 aaPredicted RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 SLC6A3Q01959 620 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 MLLT1Q03111 559 aaPredicted RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 TCEAL1Q15170 157 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 DNTTIP2Q5QJE6 756 aaKnown RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 SH3PXD2AQ5TCZ1 1133 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 C3orf20Q8ND61 904 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 TPCN2Q8NHX9 752 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 ZNF564Q8TBZ8 553 aaPredicted RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 C8orf48Q96LL4 319 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 MCEEQ96PE7 176 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 UBXN6Q9BZV1 441 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 DNAI2Q9GZS0 605 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 SYNCQ9H7C4 482 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 CYP4F11Q9HBI6 524 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 USP3Q9Y6I4 520 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 A0A0A6YYK5 440 aaPredicted RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 TMEM110-MUSTN1A8MSY1 372 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 NRG2O14511 850 aaPredicted RBP11.54□□□□□ -0.56
SCN9A-205ENST00000454569 NCK2O43639 380 aa11.54□□□□□ -0.56
SCN9A-205ENST00000454569 CLASP2O75122 1294 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms