RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 CCDC39Q9UFE4 941 aa13.78□□□□□ -0.2
PTPA-224ENST00000453358 MYO18AQ92614 2054 aaKnown RBP13.78□□□□□ -0.2
PTPA-224ENST00000453358 MYOFQ9NZM1 2061 aa13.78□□□□□ -0.2
PTPA-224ENST00000453358 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 PRPF6O94906 941 aaKnown RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 ABL1P00519 1130 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 TNNC2P02585 160 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 CFIP05156 583 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 MBL2P11226 248 aaPredicted RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 IDEP14735 1019 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 ACAP1Q15027 740 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 DUOXA1Q1HG43 343 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 DUOXA2Q1HG44 320 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 LY6G5CQ5SRR4 150 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 RRAGBQ5VZM2 374 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 DDX42Q86XP3 938 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPA-224ENST00000453358 ETFBKMTQ8IXQ9 262 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 PGBD3Q8N328 593 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 MMS19Q96T76 1030 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
PTPA-224ENST00000453358 SLC6A14Q9UN76 642 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 LHX6Q9UPM6 363 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 SMC3Q9UQE7 1217 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 CLIC4Q9Y696 253 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 IGSF10Q6WRI0 2623 aa13.77□□□□□ -0.21
PTPA-224ENST00000453358 E2F8A0AVK6 867 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 ZNF233A6NK53 670 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 KIAA0391O15091 583 aaKnown RBP13.76□□□□□ -0.21
PTPA-224ENST00000453358 GNL1P36915 607 aaPredicted RBP13.76□□□□□ -0.21
PTPA-224ENST00000453358 ATXN3P54252 364 aaPredicted RBP13.76□□□□□ -0.21
PTPA-224ENST00000453358 FAM193AP78312 1265 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 SURF1Q15526 300 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 C8orf34Q49A92 452 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 HS2ST1Q7LGA3 356 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 CBWD2Q8IUF1 395 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 WDR49Q8IV35 697 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 HDDC3Q8N4P3 179 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 CEP76Q8TAP6 659 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 SLITRK1Q96PX8 696 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 GTPBP2Q9BX10 602 aaKnown RBP13.76□□□□□ -0.21
PTPA-224ENST00000453358 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 CAPN10Q9HC96 672 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
PTPA-224ENST00000453358 SRPRBQ9Y5M8 271 aaKnown RBP13.76□□□□□ -0.21
PTPA-224ENST00000453358 PCDH15Q96QU1 1955 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 TBC1D3BA6NDS4 549 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 H0Y626 953 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 HOXC11O43248 304 aaPredicted RBP13.75□□□□□ -0.21
PTPA-224ENST00000453358 AP5Z1O43299 807 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 COCHO43405 550 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 TACC1O75410 805 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 TRIM16O95361 564 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 SERPINF2P08697 491 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
PTPA-224ENST00000453358 GABRG2P18507 467 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 RPL6Q02878 288 aaKnown RBP13.75□□□□□ -0.21
PTPA-224ENST00000453358 GAD2Q05329 585 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 GFPT1Q06210 699 aaPredicted RBP13.75□□□□□ -0.21
PTPA-224ENST00000453358 SLC36A4Q6YBV0 504 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 DEFB119Q8N690 84 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 ZNF513Q8N8E2 541 aaPredicted RBP13.75□□□□□ -0.21
PTPA-224ENST00000453358 NAT16Q8N8M0 369 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 OTUB2Q96DC9 234 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 SNX25Q9H3E2 840 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 CALCOCO1Q9P1Z2 691 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 HCN2Q9UL51 889 aa13.75□□□□□ -0.21
PTPA-224ENST00000453358 TAF4O00268 1085 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 CLDN5O00501 218 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 OPHN1O60890 802 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 TULP3O75386 442 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 CST3P01034 146 aaPredicted RBP13.74□□□□□ -0.21
PTPA-224ENST00000453358 CAPNS1P04632 268 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 FAM163BP0C2L3 166 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 CD59P13987 128 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 YWHAQP27348 245 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 TXLNAP40222 546 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 ZNF33AQ06730 810 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 IFRD2Q12894 506 aaPredicted RBP13.74□□□□□ -0.21
PTPA-224ENST00000453358 BTBD8Q5XKL5 378 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 TRMT11Q7Z4G4 463 aaKnown RBP13.74□□□□□ -0.21
PTPA-224ENST00000453358 RAB44Q7Z6P3 723 aaPredicted RBP13.74□□□□□ -0.21
PTPA-224ENST00000453358 MIB1Q86YT6 1006 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 NUP93Q8N1F7 819 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 CHCHD4Q8N4Q1 142 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 MINDY1Q8N5J2 469 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 GLIS3Q8NEA6 775 aa13.74□□□□□ -0.21
PTPA-224ENST00000453358 OR2I1PQ8NGU4 316 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms