RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 FBXO32Q969P5 355 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 ELMO3Q96BJ8 720 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 B3GNT5Q9BYG0 378 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 GZF1Q9H116 711 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 BLZF1Q9H2G9 400 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 BCCIPQ9P287 314 aaKnown RBP eCLIP12.42□□□□□ -0.42
GARNL3-210ENST00000453030 FAM208BQ5VWN6 2430 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
GARNL3-210ENST00000453030 SGK1O00141 431 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 GIPC1O14908 333 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 PHACTR2O75167 634 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 PPP6R2O75170 966 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 ALDH1A2O94788 518 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 KAT7O95251 611 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 APODP05090 189 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 YWHAQP27348 245 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 BIRC3Q13489 604 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF699Q32M78 642 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 UNC13DQ70J99 1090 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 FAM35AQ86V20 835 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 C11orf74Q86VG3 221 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 DDX42Q86XP3 938 aaKnown RBP eCLIP12.41□□□□□ -0.42
GARNL3-210ENST00000453030 NUP93Q8N1F7 819 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 IQUBQ8NA54 791 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 IL17RCQ8NAC3 791 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 RLN3Q8WXF3 142 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF516Q92618 1163 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
GARNL3-210ENST00000453030 PNKPQ96T60 521 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 MED10Q9BTT4 135 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 XYLT2Q9H1B5 865 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 SLC39A2Q9NP94 309 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 ARHGEF4Q9NR80 690 aa12.41□□□□□ -0.42
GARNL3-210ENST00000453030 ATP8B3O60423 1300 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 ATXN2Q99700 1313 aaKnown RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 PCNX2A6NKB5 2137 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 KHNYNO15037 678 aaKnown RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 POLR2DO15514 142 aaKnown RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 COCHO43405 550 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 EXOC3O60645 756 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 CUTAO60888 179 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 YEATS4O95619 227 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 IRF1P10914 325 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 SLC5A3P53794 718 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 CDH8P55286 799 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 MRPS21P82921 87 aaKnown RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 SHC2P98077 582 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 EHHADHQ08426 723 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 ZNF252P-AS1Q0IIN9 211 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 FOXC1Q12948 553 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 LY6G5CQ5SRR4 150 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 EMC10Q5UCC4 262 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 RHBDF2Q6PJF5 856 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 PDZD8Q8NEN9 1154 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 SCAMP5Q8TAC9 235 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 PLEKHO2Q8TD55 490 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 WHAMMQ8TF30 809 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 HMGB4Q8WW32 186 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 PIGKQ92643 395 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 SPACA7Q96KW9 195 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 KCNK16Q96T55 309 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 C7orf25Q9BPX7 421 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 CCSER2Q9H7U1 834 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 MAGEF1Q9HAY2 307 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 DMAP1Q9NPF5 467 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-210ENST00000453030 TMEM9BQ9NQ34 198 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 KRT82Q9NSB4 513 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 GMIPQ9P107 970 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 SH3BP1Q9Y3L3 701 aa12.4□□□□□ -0.42
GARNL3-210ENST00000453030 CACNA1GO43497 2377 aa12.4□□□□□ -0.43
GARNL3-210ENST00000453030 SPEGQ15772 3267 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-210ENST00000453030 STAU1O95793 577 aaKnown RBP12.39□□□□□ -0.43
GARNL3-210ENST00000453030 CHRM1P11229 460 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-210ENST00000453030 ATICP31939 592 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 EIF2DP41214 584 aaKnown RBP12.39□□□□□ -0.43
GARNL3-210ENST00000453030 P2RY2P41231 377 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 AFMP43652 599 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 ORC1Q13415 861 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 UAP1L1Q3KQV9 507 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 ZNF667Q5HYK9 610 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 EOGTQ5NDL2 527 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 SH3PXD2AQ5TCZ1 1133 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 CNNM4Q6P4Q7 775 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 TMEFF1Q8IYR6 380 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 GRAMD1CQ8IYS0 662 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 FRMD1Q8N878 549 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 KIAA1958Q8N8K9 716 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms