RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PXNP49023 591 aaPredicted RBP10.24□□□□□ -0.77
USP54-207ENST00000451492 SEC13P55735 322 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 LRRC63Q05C16 580 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 DMWDQ09019 674 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 GRSF1Q12849 480 aaKnown RBP eCLIP10.24□□□□□ -0.77
USP54-207ENST00000451492 CCINQ13939 588 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 PPP2R5DQ14738 602 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 ZNF528Q3MIS6 628 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 COBLL1Q53SF7 1204 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 DGKKQ5KSL6 1271 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 FSTL4Q6MZW2 842 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 C1orf228Q6PIY5 440 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 PRR23BQ6ZRT6 265 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 CRYBG2Q8N1P7 616 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 HEXIM2Q96MH2 286 aaKnown RBP10.24□□□□□ -0.77
USP54-207ENST00000451492 CYP3A43Q9HB55 503 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 FBRSL1Q9HCM7 1045 aaKnown RBP10.24□□□□□ -0.77
USP54-207ENST00000451492 CISHQ9NSE2 258 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 POLR3BQ9NW08 1133 aaPredicted RBP10.24□□□□□ -0.77
USP54-207ENST00000451492 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
USP54-207ENST00000451492 NUDT5Q9UKK9 219 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 DMXL1Q9Y485 3027 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 CACNA1HO95180 2353 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 CHURC1-FNTBB4DL54 471 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 MDM4O15151 490 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 CYP17A1P05093 508 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 BMP6P22004 513 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 ANP32AP39687 249 aaKnown RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 PPP3CCP48454 512 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 FNTBP49356 437 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 PGFP49763 221 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 GALK1P51570 392 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 MLLT6P55198 1093 aaPredicted RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 SLC7A9P82251 487 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 KDSRQ06136 332 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 ENPEPQ07075 957 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 SRSF5Q13243 272 aaKnown RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 MORC3Q14149 939 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 CREBRFQ8IUR6 639 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 ZC3H3Q8IXZ2 948 aaKnown RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 KIAA2013Q8IYS2 634 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 SPEM1Q8N4L4 309 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 DCLK2Q8N568 766 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 RPLP0P6Q8NHW5 317 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 CD101Q93033 1021 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 SLC35C1Q96A29 364 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 TMEM176AQ96HP8 235 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 DHTKD1Q96HY7 919 aaPredicted RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 DUSP9Q99956 384 aaKnown RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 P2RY13Q9BPV8 354 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 DNAI2Q9GZS0 605 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 CSNK1G1Q9HCP0 422 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 CHMP5Q9NZZ3 219 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 NCDNQ9UBB6 729 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 SH3BP1Q9Y3L3 701 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 PCDHGA2Q9Y5H1 932 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 ZFHX2Q9C0A1 2572 aaPredicted RBP10.23□□□□□ -0.77
USP54-207ENST00000451492 F5P12259 2224 aa10.23□□□□□ -0.77
USP54-207ENST00000451492 A0A1W2PQH9 124 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 BICDL2A1A5D9 508 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 ANTXRLA6NF34 631 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 PPP1R3GB7ZBB8 358 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 HHLA1C9JL84 531 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 TLR5O60602 858 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 OLFM2O95897 454 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 TBX18O95935 607 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 CALCAP01258 141 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 TDGF1P13385 188 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 CD19P15391 556 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 FMO5P49326 533 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 UBE2HP62256 183 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 AMPD2Q01433 879 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 NR1H3Q13133 447 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 PAK1Q13153 545 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 CUL2Q13617 745 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 GOLGA7BQ2TAP0 167 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 TMEM196Q5HYL7 178 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 TTI2Q6NXR4 508 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 SLC4A11Q8NBS3 891 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 OVCA2Q8WZ82 227 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 WBP2Q969T9 261 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 HHIPQ96QV1 700 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 HNRNPABQ99729 332 aaKnown RBP10.22□□□□□ -0.77
USP54-207ENST00000451492 IER2Q9BTL4 223 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 GTPBP4Q9BZE4 634 aaKnown RBP10.22□□□□□ -0.77
USP54-207ENST00000451492 FBXO44Q9H4M3 255 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 TLR8Q9NR97 1041 aaKnown RBP10.22□□□□□ -0.77
USP54-207ENST00000451492 NAGPAQ9UK23 515 aa10.22□□□□□ -0.77
USP54-207ENST00000451492 SMG5Q9UPR3 1016 aaKnown RBP10.22□□□□□ -0.77
USP54-207ENST00000451492 TRDMT1O14717 391 aaKnown RBP10.21□□□□□ -0.77
USP54-207ENST00000451492 HMBSP08397 361 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 TCF3P15923 654 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 PFKLP17858 780 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 PPP1R2P41236 205 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 RAD23BP54727 409 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 NRLP54845 237 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 DHCR24Q15392 516 aa10.21□□□□□ -0.77
USP54-207ENST00000451492 C12orf40Q86WS4 652 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms