RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 ADM5C9JUS6 153 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 ELFN1P0C7U0 828 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 RARBP10826 455 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 IL12RB1P42701 662 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 NXPH1P58417 271 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 PSMC1P62191 440 aaKnown RBP5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 PTPROQ16827 1216 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 CHMP4CQ96CF2 233 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 CNPPD1Q9BV87 410 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 C1orf43Q9BWL3 253 aa5.3□□□□□ -1.56
GTF3C3-207ENST00000451088 DLEC1Q9Y238 1755 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 RNF123Q5XPI4 1314 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 ADAMTS7Q9UKP4 1686 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 VWC2LB2RUY7 222 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 ORC4O43929 436 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 SOAT2O75908 522 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 CRKLP46109 303 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 ZNF135P52742 658 aaPredicted RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 EXOSC10Q01780 885 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 PKN2Q16513 984 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 AMOTQ4VCS5 1084 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 PLEKHO1Q53GL0 409 aaPredicted RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 HEATR3Q7Z4Q2 680 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 PPP1R32Q7Z5V6 425 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 TOR1AIP2Q8NFQ8 470 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 RGMAQ96B86 450 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 GPATCH3Q96I76 525 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 FAM167AQ96KS9 214 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 MRPL46Q9H2W6 279 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 IL17RBQ9NRM6 502 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 MRPS18AQ9NVS2 196 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 ASB6Q9NWX5 421 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 RNF186Q9NXI6 227 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 AGAP1Q9UPQ3 857 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 LUC7L2Q9Y383 392 aaKnown RBP5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 KNSTRNQ9Y448 316 aa5.29□□□□□ -1.56
GTF3C3-207ENST00000451088 ADGRA2Q96PE1 1338 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 ZNF541Q9H0D2 1346 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 A0A0B4J269 797 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 ERVV-2B6SEH9 535 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 TRIAP1O43715 76 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 CELF2O95319 508 aaKnown RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 FTLP02792 175 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 TYRP14679 529 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 AKAP5P24588 427 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 ITPKBP27987 946 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 EPS15P42566 896 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 NDUFV1P49821 464 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 TOB1P50616 345 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 MAP2K6P52564 334 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 TUBB3Q13509 450 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 PGS1Q32NB8 556 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 C1orf141Q5JVX7 400 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 TAF2Q6P1X5 1199 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 SLC30A10Q6XR72 485 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 FAM109AQ8N4B1 249 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 B3GALNT2Q8NCR0 500 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 PSD4Q8NDX1 1056 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 ZNF384Q8TF68 577 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 SARAFQ96BY9 339 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 HSPBAP1Q96EW2 488 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 NUP88Q99567 741 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 TINAGL1Q9GZM7 467 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 SIK2Q9H0K1 926 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 SAGE1Q9NXZ1 904 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 POLKQ9UBT6 870 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 ABCF2Q9UG63 623 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 FEZ2Q9UHY8 353 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 FRMD4BQ9Y2L6 1034 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 NCAPD2Q15021 1401 aa5.28□□□□□ -1.56
GTF3C3-207ENST00000451088 KIF20BQ96Q89 1820 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 F5H697 171 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 CHRM2P08172 466 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 HSPA5P11021 654 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 PHKG2P15735 406 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 TNNT2P45379 298 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 PHKA1P46020 1223 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 NEK2P51955 445 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 EIF4A2Q14240 407 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 USP50Q70EL3 339 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 CATIPQ7Z7H3 387 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 ZBTB46Q86UZ6 589 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 PPP1R3BQ86XI6 285 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 GPC2Q8N158 579 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 RFKQ969G6 155 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 PBKQ96KB5 322 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 BRIP1Q9BX63 1249 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 GTPBP4Q9BZE4 634 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 AMBRA1Q9C0C7 1298 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 SMOC2Q9H3U7 446 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 PANK3Q9H999 370 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 SLAMF7Q9NQ25 335 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 LMBRD1Q9NUN5 540 aa5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 NOP58Q9Y2X3 529 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-207ENST00000451088 COL5A3P25940 1745 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-207ENST00000451088 LINC00473A8K010 186 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms