RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 VIPR2P41587 438 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 SLC5A3P53794 718 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 NRLP54845 237 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 USP46P62068 366 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 TXNDC8Q6A555 127 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 TMEM150AQ86TG1 271 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
USP39-206ENST00000448971 YAF2Q8IY57 180 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 CELF5Q8N6W0 485 aaKnown RBP15.42■□□□□ 0.06
USP39-206ENST00000448971 MAB21L3Q8N8X9 362 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 DEPDC1BQ8WUY9 529 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 FAM3CQ92520 227 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 CYFIP2Q96F07 1278 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 MYRFLQ96LU7 910 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 HEXIM2Q96MH2 286 aaKnown RBP15.42■□□□□ 0.06
USP39-206ENST00000448971 KCNK16Q96T55 309 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 RTKNQ9BST9 563 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 INTS2Q9H0H0 1204 aaKnown RBP15.42■□□□□ 0.06
USP39-206ENST00000448971 FAM124BQ9H5Z6 455 aaPredicted RBP15.42■□□□□ 0.06
USP39-206ENST00000448971 TRPV4Q9HBA0 871 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 ANO10Q9NW15 660 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 RALGAPA1Q6GYQ0 2036 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 CFAP47Q6ZTR5 3102 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 TICRRQ7Z2Z1 1910 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 HEPACAM2A8MVW5 462 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 ARNTLO00327 626 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 PRAMEF12O95522 483 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 CHRNB1P11230 501 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 PRKCSHP14314 528 aaPredicted RBP15.41■□□□□ 0.06
USP39-206ENST00000448971 GDI1P31150 447 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 MAP3K7CLP57077 242 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 GAS6Q14393 721 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 CT47A1Q5JQC4 288 aaPredicted RBP15.41■□□□□ 0.06
USP39-206ENST00000448971 CAVIN1Q6NZI2 390 aaKnown RBP15.41■□□□□ 0.06
USP39-206ENST00000448971 PAQR9Q6ZVX9 377 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 GPIHBP1Q8IV16 184 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 NUP93Q8N1F7 819 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 E2F7Q96AV8 911 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 TMEM176AQ96HP8 235 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 SLITRK1Q96PX8 696 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 IER2Q9BTL4 223 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 TTLL2Q9BWV7 592 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 SMG9Q9H0W8 520 aaKnown RBP15.41■□□□□ 0.06
USP39-206ENST00000448971 TRPM5Q9NZQ8 1165 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 TMEM63CQ9P1W3 806 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 CDV3Q9UKY7 258 aaKnown RBP15.41■□□□□ 0.06
USP39-206ENST00000448971 USP18Q9UMW8 372 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 NUP210Q8TEM1 1887 aaPredicted RBP15.41■□□□□ 0.06
USP39-206ENST00000448971 NCANO14594 1321 aa15.41■□□□□ 0.06
USP39-206ENST00000448971 OBSL1O75147 1896 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 PES1O00541 588 aaKnown RBP15.4■□□□□ 0.06
USP39-206ENST00000448971 RTN3O95197 1032 aaPredicted RBP15.4■□□□□ 0.06
USP39-206ENST00000448971 ABL1P00519 1130 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 CKMP06732 381 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 CD19P15391 556 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 RAD23BP54727 409 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 MLLT6P55198 1093 aaPredicted RBP15.4■□□□□ 0.06
USP39-206ENST00000448971 SPEM2Q0P670 501 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 MAN2A1Q16706 1144 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 CLEC20AQ6ZU45 233 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 C11orf57Q6ZUT1 292 aaPredicted RBP15.4■□□□□ 0.06
USP39-206ENST00000448971 ARHGEF19Q8IW93 802 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 MFSD6LQ8IWD5 586 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 CMTM8Q8IZV2 173 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 SLC4A11Q8NBS3 891 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 TTC16Q8NEE8 873 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 FBXO32Q969P5 355 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 HNRNPABQ99729 332 aaKnown RBP15.4■□□□□ 0.06
USP39-206ENST00000448971 SMOQ99835 787 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 SLC46A2Q9BY10 475 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 GMEB2Q9UKD1 530 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 NFE2L3Q9Y4A8 694 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 PCDHB4Q9Y5E5 795 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 PIAS3Q9Y6X2 628 aa15.4■□□□□ 0.06
USP39-206ENST00000448971 TRAV19A0A0A6YYK7 116 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 KCNJ18B7U540 433 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 ZNF263O14978 683 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 HRO43593 1189 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 BEST1O76090 585 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 YWHAQP27348 245 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 PDE6CP51160 858 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 CCR3P51677 355 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 SATB1Q01826 763 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 GCNT1Q02742 428 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 TAF10Q12962 218 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 KCNJ12Q14500 433 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 LPAL2Q16609 132 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 PPP1R26Q5T8A7 1209 aaPredicted RBP15.39■□□□□ 0.05
USP39-206ENST00000448971 LAIR1Q6GTX8 287 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 TMEM270Q6UE05 265 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 GBP6Q6ZN66 633 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 MON1AQ86VX9 555 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 IRF2BP1Q8IU81 584 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 EHBP1Q8NDI1 1231 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 PDZD8Q8NEN9 1154 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 ZMIZ2Q8NF64 920 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 LMO3Q8TAP4 145 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 BPIFB1Q8TDL5 484 aa15.39■□□□□ 0.05
USP39-206ENST00000448971 KAT5Q92993 513 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms