RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 SCAMP5Q8TAC9 235 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 LMO3Q8TAP4 145 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 JAKMIP2Q96AA8 810 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 TMEM176AQ96HP8 235 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 SLC22A12Q96S37 553 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 TRPV5Q9NQA5 729 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 ZMYM5Q9UJ78 669 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 RAB23Q9ULC3 237 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 NUP210Q8TEM1 1887 aaPredicted RBP26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 ACACBO00763 2458 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 ANAPC1Q9H1A4 1944 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 C2orf78A6NCI8 922 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 MBD3O95983 291 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 YWHAQP27348 245 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 WEE1P30291 646 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 MTIF2P46199 727 aaKnown RBP26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 PPP1R26Q5T8A7 1209 aaPredicted RBP26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 ZNF687Q8N1G0 1237 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 PPM1KQ8N3J5 372 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 TTC16Q8NEE8 873 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 FAM3CQ92520 227 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 USP13Q92995 863 aaPredicted RBP26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 CCL26Q9Y258 94 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 PIAS3Q9Y6X2 628 aa26.49■■□□□ 1.83
HTATSF1-203ENST00000448450 TRAV19A0A0A6YYK7 116 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 RTN3O95197 1032 aaPredicted RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 TBXAS1P24557 533 aaPredicted RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 YWHAEP62258 255 aaKnown RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 MAMSTRQ6ZN01 415 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 RBM43Q6ZSC3 357 aaKnown RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 RRAGAQ7L523 313 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 CELF5Q8N6W0 485 aaKnown RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 ARL14EPQ8N8R7 260 aaPredicted RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 KAT5Q92993 513 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 ZFYVE19Q96K21 471 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 SLITRK1Q96PX8 696 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 INTS2Q9H0H0 1204 aaKnown RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 THAP9Q9H5L6 903 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 CSNK1G1Q9HCP0 422 aa26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 CHORDC1Q9UHD1 332 aaPredicted RBP26.48■■□□□ 1.83
HTATSF1-203ENST00000448450 TNFRSF10BO14763 440 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 CKMP06732 381 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 CCR3P51677 355 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 SLC5A3P53794 718 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 ATXN1P54253 815 aaKnown RBP26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 CLEC20AQ6ZU45 233 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 ARHGEF19Q8IW93 802 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 BPIFB1Q8TDL5 484 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 FBXO32Q969P5 355 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 CRACR2AQ9BSW2 395 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 TDP1Q9NUW8 608 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 OBP2AQ9NY56 170 aa26.47■■□□□ 1.83
HTATSF1-203ENST00000448450 ZNF840PA6NDX5 716 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 SOBPA7XYQ1 873 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 USP17L7P0C7H9 530 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 TDGF1P13385 188 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 HDCP19113 662 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 SASS6Q6UVJ0 657 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 UBR7Q8N806 425 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 FAM124BQ9H5Z6 455 aaPredicted RBP26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 GCNT4Q9P109 453 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 PCDHB4Q9Y5E5 795 aa26.46■■□□□ 1.83
HTATSF1-203ENST00000448450 CD19P15391 556 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 FCHO2Q0JRZ9 810 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 CCDC183Q5T5S1 534 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 FAM114A1Q8IWE2 563 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 TTC8Q8TAM2 541 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 RTKNQ9BST9 563 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 DUSP16Q9BY84 665 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 LMAN1LQ9HAT1 526 aa26.45■■□□□ 1.82
HTATSF1-203ENST00000448450 CHADO15335 359 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 PPP3CCP48454 512 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 LAIR1Q6GTX8 287 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 TMEM270Q6UE05 265 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 GPRIN1Q7Z2K8 1008 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 CSGALNACT1Q8TDX6 532 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 SAMSN1Q9NSI8 373 aaKnown RBP26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 THG1LQ9NWX6 298 aaKnown RBP26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 IL37Q9NZH6 218 aa26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 KMT2BQ9UMN6 2715 aaPredicted RBP26.44■■□□□ 1.82
HTATSF1-203ENST00000448450 HHLA1C9JL84 531 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 ACO1P21399 889 aaKnown RBP26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 TGM1P22735 817 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 ARHGAP29Q52LW3 1261 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 CT47A1Q5JQC4 288 aaPredicted RBP26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 C1orf228Q6PIY5 440 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 RIN3Q8TB24 985 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 MSANTD3Q96H12 275 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 CNTNAP3BQ96NU0 1288 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 CNTNAP3Q9BZ76 1288 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 RNF38Q9H0F5 515 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 PARD6AQ9NPB6 346 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 UBE2TQ9NPD8 197 aaPredicted RBP26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 GKN1Q9NS71 199 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 COMMD8Q9NX08 183 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 GMIPQ9P107 970 aa26.43■■□□□ 1.82
HTATSF1-203ENST00000448450 SLC9A1P19634 815 aa26.42■■□□□ 1.82
HTATSF1-203ENST00000448450 ZNF268Q14587 947 aaPredicted RBP26.42■■□□□ 1.82
HTATSF1-203ENST00000448450 LPAL2Q16609 132 aa26.42■■□□□ 1.82
HTATSF1-203ENST00000448450 SGO2Q562F6 1265 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms