RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 JAMLQ86YT9 394 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 BBS5Q8N3I7 341 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 USP38Q8NB14 1042 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ZNF564Q8TBZ8 553 aaPredicted RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 FAM162AQ96A26 154 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 RNF25Q96BH1 459 aaPredicted RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 CDCA7Q9BWT1 371 aaPredicted RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 EFCAB1Q9HAE3 211 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ACP6Q9NPH0 428 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ZNF233A6NK53 670 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ZNF846Q147U1 533 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 RASA2Q15283 850 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ABCB5Q2M3G0 1257 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 BRDTQ58F21 947 aaPredicted RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 GPATCH4Q5T3I0 446 aaKnown RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 CCDC33Q8N5R6 958 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 BEST2Q8NFU1 509 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 SLC30A5Q8TAD4 765 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 DIS3LQ8TF46 1054 aaKnown RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 PCDHAC2Q9Y5I4 1007 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 TJP1Q07157 1748 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 MYO5AQ9Y4I1 1855 aaKnown RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 RALBP11234 206 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 CYP11B2P19099 503 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 PURAQ00577 322 aaKnown RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 ZNF543Q08ER8 600 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
SMC6-207ENST00000448223 SLC25A41Q8N5S1 370 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 TSPAN14Q8NG11 270 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 SLC35G2Q8TBE7 412 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ULK4Q96C45 1275 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 SERHL2Q9H4I8 314 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 SERHLQ9NQF3 203 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 AKAP3O75969 853 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ALAS1P13196 640 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 CHI3L2Q15782 390 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ZSWIM7Q19AV6 140 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 RNF220Q5VTB9 566 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 SVOPQ8N4V2 548 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 UXS1Q8NBZ7 420 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 FAM84AQ96KN4 292 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 TBATAQ96M53 351 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 GCNAQ96QF7 691 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 SENP7Q9BQF6 1050 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 ZNF221Q9UK13 617 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 NAGPAQ9UK23 515 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 PFASO15067 1338 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 BCL9O00512 1426 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 TNS2Q63HR2 1409 aa9.53□□□□□ -0.88
SMC6-207ENST00000448223 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.88
SMC6-207ENST00000448223 F5H6K3 240 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 FOXN3O00409 490 aaPredicted RBP9.52□□□□□ -0.88
SMC6-207ENST00000448223 MTSS1O43312 755 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 SEC24AO95486 1093 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 FTLP02792 175 aaPredicted RBP9.52□□□□□ -0.88
SMC6-207ENST00000448223 MYL2P10916 166 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 KLRC3Q07444 240 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 NSUN2Q08J23 767 aaKnown RBP eCLIP9.52□□□□□ -0.88
SMC6-207ENST00000448223 SPIDRQ14159 915 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 PDK3Q15120 406 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 MZT2BQ6NZ67 158 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 PSMA8Q8TAA3 256 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 MAGEC3Q8TD91 643 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 TMEM237Q96Q45 408 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 KLF6Q99612 283 aaPredicted RBP9.52□□□□□ -0.88
SMC6-207ENST00000448223 ELOVL6Q9H5J4 265 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 UVRAGQ9P2Y5 699 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 CTNNAL1Q9UBT7 734 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 DMTF1Q9Y222 760 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 STON1Q9Y6Q2 735 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 PHRF1Q9P1Y6 1649 aaKnown RBP9.52□□□□□ -0.88
SMC6-207ENST00000448223 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.88
SMC6-207ENST00000448223 NOS1APO75052 506 aaPredicted RBP9.52□□□□□ -0.89
SMC6-207ENST00000448223 HSMCR30P0CW71 290 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 RAG1P15918 1043 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ITGAXP20702 1163 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 GTF2H1P32780 548 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ABL2P42684 1182 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 RAD23AP54725 363 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 MIS18BP1Q6P0N0 1132 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 PLEKHA8Q96JA3 519 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 MNTQ99583 582 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 DDX50Q9BQ39 737 aaKnown RBP9.52□□□□□ -0.89
SMC6-207ENST00000448223 SUGT1Q9Y2Z0 365 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 OPLAHO14841 1288 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 TLR2O60603 784 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ZBED4O75132 1171 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 PSMA2P25787 234 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 FLT3P36888 993 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 TNFAIP2Q03169 654 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 PTK7Q13308 1070 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 BLMHQ13867 455 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 C5orf22Q49AR2 442 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 MTHFD1LQ6UB35 978 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 C16orf86Q6ZW13 317 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 RASSF5Q8WWW0 418 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 HSPH1Q92598 858 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms