RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CD3EAPO15446 510 aaKnown RBP5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 KCNQ3O43525 872 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 TIMM44O43615 452 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PEX1O43933 1283 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 ZNF500O60304 480 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 RASSF9O75901 435 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 RHOBTB3O94955 611 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 ERBB2P04626 1255 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PDHA1P08559 390 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 TECP42680 631 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PTDSS1P48651 473 aaKnown RBP5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 CPT1AP50416 773 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PDE6CP51160 858 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 MAPK10P53779 464 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 SATB1Q01826 763 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PPFIA1Q13136 1202 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PMS2P11Q13670 270 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLC29A2Q14542 456 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PLAG1Q6DJT9 500 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 LAIR1Q6GTX8 287 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 MAATS1Q7Z4T9 603 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 CCDC33Q8N5R6 958 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PDILTQ8N807 584 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 TOR1AIP2Q8NFQ8 470 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 FKBP10Q96AY3 582 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PDLIM2Q96JY6 352 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PBKQ96KB5 322 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 NEUROD6Q96NK8 337 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 FAM83DQ9H4H8 585 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 CYP4F11Q9HBI6 524 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 GJB4Q9NTQ9 266 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 ZSCAN32Q9NX65 697 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 RRN3Q9NYV6 651 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 HDAC9Q9UKV0 1011 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 PCDHGB2Q9Y5G2 931 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 SNX14Q9Y5W7 946 aa5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 LRRFIP2Q9Y608 721 aaKnown RBP5.21□□□□□ -1.58
HMGB1P48-201ENST00000446155 CYR61O00622 381 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ADAMTS3O15072 1205 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 THAP12O43422 761 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 RNASEH2AO75792 299 aaKnown RBP5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 INMTO95050 263 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLPIP03973 132 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 HARSP12081 509 aaKnown RBP5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 TNFAIP3P21580 790 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ADORA2AP29274 412 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 TIAL1Q01085 375 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 DPTQ07507 201 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 KCTD2Q14681 263 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ZNF169Q14929 603 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLC35G1Q2M3R5 365 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 RNF44Q7L0R7 432 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ANKRD18AQ8IVF6 992 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLC15A3Q8IY34 581 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ABRAQ8N0Z2 381 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ZNF384Q8TF68 577 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 IPCEF1Q8WWN9 437 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 PPP2R3CQ969Q6 453 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 TMEM41AQ96HV5 264 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 FBXL20Q96IG2 436 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 ALG8Q9BVK2 526 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 DKK3Q9UBP4 350 aa5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 FBXO2Q9UK22 296 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P48-201ENST00000446155 A0A1B0GVC2 190 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 J3KRW8 73 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 RAB27BO00194 218 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLC16A3O15427 465 aaKnown RBP5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 GCP02774 474 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 CSTBP04080 98 aaKnown RBP5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 CHRM2P08172 466 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 ELFN1P0C7U0 828 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 GDF5P43026 501 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 BCAT1P54687 386 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 COL10A1Q03692 680 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 FHL2Q14192 279 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 STARD3Q14849 445 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 TBCCQ15814 346 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 CERCAMQ5T4B2 595 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 ZNF280DQ6N043 979 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 PGBD2Q6P3X8 592 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 USP51Q70EK9 711 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 BEND5Q7L4P6 421 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 FAM9BQ8IZU0 186 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 FANCBQ8NB91 859 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLC16A11Q8NCK7 471 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 NAXEQ8NCW5 288 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 SUPT20HQ8NEM7 779 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 DNAJB14Q8TBM8 379 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 SOCS4Q8WXH5 440 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 TFAP2BQ92481 460 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 TBC1D20Q96BZ9 403 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 PPM1MQ96MI6 270 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 TTPALQ9BTX7 342 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 GBA2Q9HCG7 927 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 EHD3Q9NZN3 535 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 VPS51Q9UID3 782 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 PACSIN3Q9UKS6 424 aa5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 MAGED2Q9UNF1 606 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P48-201ENST00000446155 SH2B3Q9UQQ2 575 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms