RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PPARGC1AQ9UBK2 798 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 PACSIN3Q9UKS6 424 aa13.7□□□□□ -0.22
SLC48A1-201ENST00000442218 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 CALB1P05937 261 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 NFICP08651 508 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 ABHD2P08910 425 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 SLC25A11Q02978 314 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 AMHR2Q16671 573 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 EFHC2Q5JST6 749 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TMEM154Q6P9G4 183 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TRMT10BQ6PF06 316 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 HACE1Q8IYU2 909 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 NAT8LQ8N9F0 302 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TTC1Q99614 292 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 MRPL42Q9Y6G3 142 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 HCRTO43612 131 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 SORBS2O94875 1100 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 IQCF3P0C7M6 154 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 UBTFL6P0CB48 400 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 ESRRAP11474 423 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TBXAS1P24557 533 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 MXRA7P84157 204 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 DPYSL3Q14195 570 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 NOL9Q5SY16 702 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 OR6B2Q6IFH4 312 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TRIM72Q6ZMU5 477 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 POU5F2Q8N7G0 328 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 AGR3Q8TD06 166 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 MOCOSQ96EN8 888 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 ATXN7L3BQ96GX2 97 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 C12orf42Q96LP6 360 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 HEXIM2Q96MH2 286 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 SYNJ2BP-COX16A0A087WUM0 186 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 C19orf81C9J6K1 198 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 ITGB3P05106 788 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 PTPN4P29074 926 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TMPRSS15P98073 1019 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 STXBP2Q15833 593 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 MPP5Q8N3R9 675 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 ZNF276Q8N554 614 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 MAB21L3Q8N8X9 362 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 BANPQ8N9N5 519 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 DNAJC9Q8WXX5 260 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 C20orf27Q9GZN8 174 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 MIS12Q9H081 205 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 COX16Q9P0S2 106 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 ACTL7BQ9Y614 415 aa13.69□□□□□ -0.22
SLC48A1-201ENST00000442218 FCHO1O14526 889 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 MCF2LO15068 1137 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TBX10O75333 385 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 LYPLA1O75608 230 aaPredicted RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 PRKCBP05771 671 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 ITGAVP06756 1048 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 ZCCHC18P0CG32 403 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TFE3P19532 575 aaPredicted RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 PHBP35232 272 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 ASPAP45381 313 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 ABCG1P45844 678 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 RASSF2P50749 326 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 STAT5BP51692 787 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 UBAP2LQ14157 1087 aaKnown RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 DUOXA2Q1HG44 320 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 Q3C1V9 767 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 C4orf50Q6ZRC1 276 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TREML1Q86YW5 311 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 PHC3Q8NDX5 983 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 CPB2Q96IY4 423 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 RILPQ96NA2 401 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 DHX33Q9H6R0 707 aaKnown RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 ELP3Q9H9T3 547 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 KCNK13Q9HB14 408 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 FAM49BQ9NUQ9 324 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TAS2R1Q9NYW7 299 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 USP18Q9UMW8 372 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TCRBV5S1A1TA0A578 114 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 B2RBV5 119 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 IRF6O14896 467 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 RBL1P28749 1068 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 NAMPTP43490 491 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 PIGHQ14442 188 aaPredicted RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 CA9Q16790 459 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 TRNP1Q6NT89 227 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 POLNQ7Z5Q5 900 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 PPP1R36Q96LQ0 422 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 SRPK1Q96SB4 655 aaKnown RBP13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 EBF4Q9BQW3 602 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 B3GNT5Q9BYG0 378 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 ACSS3Q9H6R3 686 aa13.68□□□□□ -0.22
SLC48A1-201ENST00000442218 C17orf75Q9HAS0 396 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms