RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 CXCL12P48061 93 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 IFNAR2P48551 515 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CBWD6Q4V339 395 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CBWD3Q5JTY5 395 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CBWD5Q5RIA9 395 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 NAIF1Q69YI7 327 aaPredicted RBP20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CLEC20AQ6ZU45 233 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CPA6Q8N4T0 437 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 ATP2A3Q93084 1043 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CHORDC1Q9UHD1 332 aaPredicted RBP20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 CPQQ9Y646 472 aa20.04■□□□□ 0.8
HMGB3P22-201ENST00000442010 SPAG17Q6Q759 2223 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 MYO18AQ92614 2054 aaKnown RBP20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 K7ESF4 209 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 STX10O60499 249 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 ABL1P00519 1130 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 GALK1P51570 392 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 MAP3K7CLP57077 242 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 AMPD2Q01433 879 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 CCDC150Q8NCX0 1101 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 ATRIPQ8WXE1 791 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 TATDN2Q93075 761 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 SLC35C1Q96A29 364 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 CYFIP2Q96F07 1278 aa20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 ZFRQ96KR1 1074 aaKnown RBP20.03■□□□□ 0.8
HMGB3P22-201ENST00000442010 PPP1R3GB7ZBB8 358 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 COCHO43405 550 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 FAM200BP0CF97 657 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 CD58P19256 250 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 ADORA2BP29275 332 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 PGFP49763 221 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 TUBP50607 506 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 GRSF1Q12849 480 aaKnown RBP eCLIP20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 MORC3Q14149 939 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 GAB4Q2WGN9 574 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 PKN3Q6P5Z2 889 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 GPRIN1Q7Z2K8 1008 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 TTC16Q8NEE8 873 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 EZH1Q92800 747 aaPredicted RBP20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 DUSP9Q99956 384 aaKnown RBP20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 EPC1Q9H2F5 836 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 GMIPQ9P107 970 aa20.02■□□□□ 0.8
HMGB3P22-201ENST00000442010 PSMA7O14818 248 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 EGFP01133 1207 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 MBL2P11226 248 aaPredicted RBP20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 NRLP54845 237 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 PPP2R5DQ14738 602 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 DCAF17Q5H9S7 520 aaPredicted RBP20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 HECTD3Q5T447 861 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 TTI2Q6NXR4 508 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 FOXR2Q6PJQ5 311 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 ADGRG2Q8IZP9 1017 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 ARID3AQ99856 593 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 P2RY13Q9BPV8 354 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 FBXO44Q9H4M3 255 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 FAM124BQ9H5Z6 455 aaPredicted RBP20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 CCSER2Q9H7U1 834 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 PNPLA8Q9NP80 782 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 CISHQ9NSE2 258 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 SMPD4Q9NXE4 827 aa20.01■□□□□ 0.79
HMGB3P22-201ENST00000442010 FRYLO94915 3013 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 DRD1P21728 446 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 HOXC13P31276 330 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 PPP1R2P41236 205 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 RAD23BP54727 409 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 DMWDQ09019 674 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 STIM1Q13586 685 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 PPP1R26Q5T8A7 1209 aaPredicted RBP20■□□□□ 0.79
HMGB3P22-201ENST00000442010 TCERG1LQ5VWI1 586 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 FILIP1Q7Z7B0 1213 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 SLC4A11Q8NBS3 891 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 CEP63Q96MT8 703 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 ARMCX3Q9UH62 379 aaPredicted RBP20■□□□□ 0.79
HMGB3P22-201ENST00000442010 RALGAPA1Q6GYQ0 2036 aa20■□□□□ 0.79
HMGB3P22-201ENST00000442010 CHURC1-FNTBB4DL54 471 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 NFATC1O95644 943 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 TRIM21P19474 475 aaKnown RBP19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 HOXA6P31267 233 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 OPRD1P41143 372 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 NR1H3Q13133 447 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 ZNF394Q53GI3 561 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 DDX42Q86XP3 938 aaKnown RBP eCLIP19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 TTC39CQ8N584 583 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 CD101Q93033 1021 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 DUSP16Q9BY84 665 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 METTL14Q9HCE5 456 aaKnown RBP19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 CFAP97Q9P2B7 532 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 SCML2Q9UQR0 700 aa19.99■□□□□ 0.79
HMGB3P22-201ENST00000442010 DCHS1Q96JQ0 3298 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 PMM2O15305 246 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 RNF40O75150 1001 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 CYP17A1P05093 508 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 KIF11P52732 1056 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 RUBCNQ92622 972 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 TMEM176AQ96HP8 235 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 HEXIM2Q96MH2 286 aaKnown RBP19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 CYLDQ9NQC7 956 aa19.98■□□□□ 0.79
HMGB3P22-201ENST00000442010 OSER1Q9NX31 292 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms