RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 EPB41L5Q9HCM4 733 aa17.82■□□□□ 0.44
TMEM39B-203ENST00000441402 TMLHEQ9NVH6 421 aa17.82■□□□□ 0.44
TMEM39B-203ENST00000441402 ZNF446Q9NWS9 450 aa17.82■□□□□ 0.44
TMEM39B-203ENST00000441402 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
TMEM39B-203ENST00000441402 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM39B-203ENST00000441402 BRCA2P51587 3418 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 TBKBP1A7MCY6 615 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 ZMYND10O75800 440 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 TJP3O95049 919 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 FGFR3P22607 806 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 KDELR1P24390 212 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 MATKP42679 507 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 PTGIRP43119 386 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 SLC11A1P49279 550 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 TKTL1P51854 596 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 DRG2P55039 364 aaKnown RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 YWHAZP63104 245 aaKnown RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 CCNG2Q16589 344 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 C15orf59Q2T9L4 293 aaPredicted RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 ODF2Q5BJF6 829 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 CYP4V2Q6ZWL3 525 aaPredicted RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 STRADAQ7RTN6 431 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 VSIG1Q86XK7 387 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 DCP1BQ8IZD4 617 aaKnown RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 SIX6OS1Q8N1H7 587 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 LRRC43Q8N309 656 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 NT5C3BQ969T7 300 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 CFAP57Q96MR6 1250 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 KCNK16Q96T55 309 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 OXCT2Q9BYC2 517 aaPredicted RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 DMAP1Q9NPF5 467 aaPredicted RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 TMEM30AQ9NV96 361 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 FEZ2Q9UHY8 353 aaPredicted RBP17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
TMEM39B-203ENST00000441402 PTPRDP23468 1912 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 NLRC5Q86WI3 1866 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 hCG_1818297A0A087WSY0 165 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 EFCAB14O75071 495 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 DAB1O75553 588 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 DGKIO75912 1065 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 NOS2P35228 1153 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 GJC1P36383 396 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 CACNA2D1P54289 1103 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 DAOAP59103 153 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 MRPS25P82663 173 aaKnown RBP17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 DR1Q01658 176 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 GUCY2DQ02846 1103 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 NFE2Q16621 373 aaPredicted RBP17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 SH3PXD2AQ5TCZ1 1133 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 PM20D1Q6GTS8 502 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 CCDC137Q6PK04 289 aaKnown RBP17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 BNIPLQ7Z465 357 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 ANKS1BQ7Z6G8 1248 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 IRGQQ8WZA9 623 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 TOP1MTQ969P6 601 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 FUBP3Q96I24 572 aaKnown RBP eCLIP17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 SLC2A13Q96QE2 648 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 TMEM209Q96SK2 561 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 RAB17Q9H0T7 212 aa17.8■□□□□ 0.44
TMEM39B-203ENST00000441402 SF3B1O75533 1304 aaKnown RBP eCLIP17.8■□□□□ 0.443e-6■■■■■ 137.9
TMEM39B-203ENST00000441402 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 LRRD1A4D1F6 860 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 OR6C75A6NL08 312 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 PI4K2BG5E9Z4 385 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 TTI1O43156 1089 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 PRPSAP2O60256 369 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 EFEMP2O95967 443 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 BDNFP23560 247 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 NDUFV1P49821 464 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 ARSEP51690 589 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 HDAC4P56524 1084 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 CUL1Q13616 776 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 SLC25A52Q3SY17 297 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 ZFYVE27Q5T4F4 411 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 TTC27Q6P3X3 843 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 DRICH1Q6PGQ1 229 aaPredicted RBP17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 FAM71BQ8TC56 605 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 FAM172AQ8WUF8 416 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 PEBP4Q96S96 227 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 HEMGNQ9BXL5 484 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 DCLK3Q9C098 648 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 ZWILCHQ9H900 591 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 PCSK1NQ9UHG2 260 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 UTP11Q9Y3A2 253 aaKnown RBP17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 USP3Q9Y6I4 520 aa17.79■□□□□ 0.44
TMEM39B-203ENST00000441402 TRIM43BA6NCK2 446 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 ZNF487B1APH4 448 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 MDM4O15151 490 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 TBC1D4O60343 1298 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 HSPA1AP0DMV8 641 aaKnown RBP17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 MYBL2P10244 700 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 ATP11AP98196 1134 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 PDK2Q15119 407 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 FAM171A1Q5VUB5 890 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
TMEM39B-203ENST00000441402 FUT10Q6P4F1 479 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms