RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 DACT2Q5SW24 774 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 IL31Q6EBC2 164 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 PGM2L1Q6PCE3 622 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 BLOC1S2Q6QNY1 142 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 Q6ZNX1 250 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 PNMA8AQ86V59 439 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC83Q8IWF9 413 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 SPICE1Q8N0Z3 855 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 KBTBD3Q8NAB2 608 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 GPR150Q8NGU9 434 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 GPT2Q8TD30 523 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 ANP32BQ92688 251 aaKnown RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 HDAC10Q969S8 669 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 SYAP1Q96A49 352 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 VOPP1Q96AW1 172 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 HSPBAP1Q96EW2 488 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 NEK1Q96PY6 1258 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 SPATA5L1Q9BVQ7 753 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 PANK2Q9BZ23 570 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 C11orf54Q9H0W9 315 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 KIAA1586Q9HCI6 787 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 DMRT3Q9NQL9 472 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZNF277Q9NRM2 450 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 TDP1Q9NUW8 608 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 ASAP1Q9ULH1 1129 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 EPN1Q9Y6I3 576 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 COX11Q9Y6N1 276 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 PARP4Q9UKK3 1724 aaKnown RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 KCPQ6ZWJ8 1503 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 SPATA31A6Q5VVP1 1343 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 TUBGCP6Q96RT7 1819 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 RPAP1Q9BWH6 1393 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 JCADQ9P266 1359 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 A0A1B0GUL7 405 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 ANO9A1A5B4 782 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 MASP2O00187 686 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 GOLIM4O00461 696 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 RNF113AO15541 343 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 SGTAO43765 313 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PEX1O43933 1283 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 LETM1O95202 739 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 LARGE1O95461 756 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CSF1RP07333 972 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 IFIT1P09914 478 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CDK4P11802 303 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 TYRP1P17643 537 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PDCP20941 246 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 HTR3AP46098 478 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 NEK3P51956 506 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 VAV2P52735 878 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CTXN1P60606 82 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 HSD11B2P80365 405 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PIGFQ07326 219 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PPP3CAQ08209 521 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZNF844Q08AG5 666 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC173Q0VFZ6 552 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 IFIT5Q13325 482 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 MTM1Q13496 603 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 MORC3Q14149 939 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 RAB39AQ14964 217 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CSRP2Q16527 193 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 LRRC24Q50LG9 513 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 TTC39AQ5SRH9 613 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 C10orf62Q5T681 223 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 METRNLQ641Q3 311 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 GRASPQ7Z6J2 395 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZNF589Q86UQ0 364 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCHCR1Q8TD31 782 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 ACTRT2Q8TDY3 377 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PTCD3Q96EY7 689 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 EDC3Q96F86 508 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 TEKT5Q96M29 485 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 Q96MF0 132 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PPP1R9BQ96SB3 815 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PACSIN1Q9BY11 444 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 TEX101Q9BY14 249 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PUS3Q9BZE2 481 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 LDAHQ9H6V9 325 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PAG1Q9NWQ8 432 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 MKS1Q9NXB0 559 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 TAGLN3Q9UI15 199 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 TPCN1Q9ULQ1 816 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 ACTL7AQ9Y615 435 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 XIRP1Q702N8 1843 aaKnown RBP3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 GLI3P10071 1580 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 MAP3K15Q6ZN16 1313 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 SH3TC1Q8TE82 1336 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 CDHR2Q9BYE9 1310 aa3.93□□□□□ -1.78
HMGB3P11-201ENST00000440127 PALLDQ8WX93 1383 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 LAMB4A4D0S4 1761 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 STRCQ7RTU9 1775 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 SYCE3A1L190 88 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 ANKRD18BA2A2Z9 1011 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 ERVV-1B6SEH8 477 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 KIAA0391O15091 583 aaKnown RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 IL33O95760 270 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 CYP19A1P11511 503 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 IL6STP40189 918 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 CDC42EP1Q00587 391 aa3.92□□□□□ -1.78
HMGB3P11-201ENST00000440127 HLFQ16534 295 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms