RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SMAPO00193 183 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 PDHXO00330 501 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ENDOD1O94919 500 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ATP2A2P16615 1042 aaKnown RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 GRM5P41594 1212 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 MSH2P43246 934 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 YARSP54577 528 aaKnown RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ELF3P78545 371 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 SLC1A5Q15758 541 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 LRRC8CQ8TDW0 803 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 RNF157Q96PX1 679 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 FAM49AQ9H0Q0 323 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-214ENST00000439122 SLCO1B3Q9NPD5 702 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 PHTF1Q9UMS5 762 aa12.66□□□□□ -0.38
HDAC8-214ENST00000439122 PPEF2O14830 753 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 TYROBPO43914 113 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 MAP3K6O95382 1288 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 SNAI1O95863 264 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-214ENST00000439122 SDC4P31431 198 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 STILQ15468 1287 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 SEPT7Q16181 437 aaKnown RBP12.65□□□□□ -0.38
HDAC8-214ENST00000439122 PDK4Q16654 411 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
HDAC8-214ENST00000439122 GLRA4Q5JXX5 417 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 LVRNQ6Q4G3 990 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 OLFML1Q6UWY5 402 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 DPP9Q86TI2 863 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-214ENST00000439122 TTC30AQ86WT1 665 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 GTF3C2Q8WUA4 911 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-214ENST00000439122 FAM172AQ8WUF8 416 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 FAF2Q96CS3 445 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
HDAC8-214ENST00000439122 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 RNF19AQ9NV58 838 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 SETD4Q9NVD3 440 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 FETUBQ9UGM5 382 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 HES2Q9Y543 173 aa12.65□□□□□ -0.38
HDAC8-214ENST00000439122 RBM47A0AV96 593 aaKnown RBP12.65□□□□□ -0.39
HDAC8-214ENST00000439122 CFAP73A6NFT4 308 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 GOLGA8RI6L899 631 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 CHUKO15111 745 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 KCNN4O15554 427 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 MGRN1O60291 552 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 MMP3P08254 477 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 SMPD1P17405 629 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 ELK3P41970 407 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 NCALDP61601 193 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 MGAT5Q09328 741 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 BNIP1Q12981 228 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 BOLA3Q53S33 107 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 RNF43Q68DV7 783 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 ZNF410Q86VK4 478 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 ECHDC2Q86YB7 292 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 IGDCC3Q8IVU1 814 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 PLD5Q8N7P1 536 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 KATNBL1Q9H079 304 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 FAM124BQ9H5Z6 455 aaPredicted RBP12.65□□□□□ -0.39
HDAC8-214ENST00000439122 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 HESX1Q9UBX0 185 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 TUBGCP4Q9UGJ1 667 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 STARD13Q9Y3M8 1113 aa12.65□□□□□ -0.39
HDAC8-214ENST00000439122 APOL1O14791 398 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 AVILO75366 819 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 BCAR1P56945 870 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 SLC6A3Q01959 620 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 PDK2Q15119 407 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 DGKDQ16760 1214 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-214ENST00000439122 LDLRAD1Q5T700 205 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 CATSPER4Q7RTX7 472 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 OR6J1Q8NGC5 347 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 PPP1R13LQ8WUF5 828 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-214ENST00000439122 DHRS4Q9BTZ2 278 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 EIF2AQ9BY44 585 aaKnown RBP12.64□□□□□ -0.39
HDAC8-214ENST00000439122 B3GNT5Q9BYG0 378 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 IKBKGQ9Y6K9 419 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 CENPFP49454 3210 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 PLXNB2O15031 1838 aa12.64□□□□□ -0.39
HDAC8-214ENST00000439122 KBTBD13C9JR72 458 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 STRNO43815 780 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 ZWINTO95229 277 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 DESP17661 470 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 IL4RP24394 825 aa12.63□□□□□ -0.39
HDAC8-214ENST00000439122 HOXA11P31270 313 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 GCLCP48506 637 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 YWHAGP61981 247 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC8-214ENST00000439122 KCNJ2P63252 427 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms