RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 hCG_2014768A0A024R1R8 64 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 AMPD1P23109 780 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 SP2Q02086 613 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 FSD1LQ9BXM9 530 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 C20orf96Q9NUD7 363 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 hCG_1818297A0A087WSY0 165 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 ZMPSTE24O75844 475 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 TPI1P60174 286 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 AP2B1P63010 937 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 NSUN2Q08J23 767 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 FOXR2Q6PJQ5 311 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 CENPTQ96BT3 561 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 PCDH9Q9HC56 1237 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 SETD4Q9NVD3 440 aa12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 ZC3H4Q9UPT8 1303 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-206ENST00000437932 GOLGA8QA0A0J9YX86 632 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 GOLGA8OA6NCC3 632 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 GOLGA8NF8WBI6 632 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 INSRRP14616 1297 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 KCNA3P22001 575 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 KPNB1Q14974 876 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 EEF1DP3Q658K8 133 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 YTHDF3Q7Z739 585 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■■□□ 17.2
PDLIM5-206ENST00000437932 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 ADA2Q9NZK5 511 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 ADCY3O60266 1144 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 DDNO94850 711 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 IL18RAPO95256 599 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 MAP3K7CLP57077 242 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 VGLL4Q14135 290 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 HIC1Q14526 733 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 SPATS2LQ9NUQ6 558 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 DNAJC16Q9Y2G8 782 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 DHX15O43143 795 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 GPC4O75487 556 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 LMNAP02545 664 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 FDX1P10109 184 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 TFB1MQ8WVM0 346 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 SPATC1LQ9H0A9 340 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 TASP1Q9H6P5 420 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 E9PBE3 544 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 M0QYT0 321 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 KLHL41O60662 606 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 KCNA2P16389 499 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 MX2P20592 715 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 UBAP2LQ14157 1087 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 TMEM192Q8IY95 271 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 OSMRQ99650 979 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 ZNF536O15090 1300 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 TCRBV7S3A2A0A539 114 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 HMBSP08397 361 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 GPR162Q16538 588 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 KIF19Q2TAC6 998 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 TCHHL1Q5QJ38 904 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 C4orf50Q6ZRC1 276 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 POLNQ7Z5Q5 900 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 BRSK2Q8IWQ3 736 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 GALNT4Q8N4A0 578 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 TFAP2BQ92481 460 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 SRPK1Q96SB4 655 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 WWP1Q9H0M0 922 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 AP5M1Q9H0R1 490 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
PDLIM5-206ENST00000437932 ZACNQ401N2 412 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 ARMCX2Q7L311 632 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 ECHDC2Q86YB7 292 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 ACO2Q99798 780 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 HMGXB4Q9UGU5 601 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 TEX9Q8N6V9 391 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 MARK4Q96L34 752 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 WDR35Q9P2L0 1181 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 SLC39A10Q9ULF5 831 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 PDE5AO76074 875 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 NCAM1P13591 858 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 ENO3P13929 434 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 MGAT1P26572 445 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 COG7P83436 770 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 ABHD15Q6UXT9 468 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 CATSPERGQ6ZRH7 1159 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 SPATA24Q86W54 205 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 ZNF669Q96BR6 464 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 LRGUKQ96M69 825 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 PFDN4Q9NQP4 134 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 AP4E1Q9UPM8 1137 aa12.09□□□□□ -0.47
PDLIM5-206ENST00000437932 AFG3L2Q9Y4W6 797 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms