RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PTP4A2Q12974 167 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 GOLGA7BQ2TAP0 167 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 PKDCCQ504Y2 493 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 SPOUT1Q5T280 376 aaKnown RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 C10orf76Q5T2E6 689 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 NAA35Q5VZE5 725 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM171BQ6P995 826 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 RSPO2Q6UXX9 243 aaPredicted RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF662Q6ZS27 426 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 H2AFVQ71UI9 128 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF438Q7Z4V0 828 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 BTLAQ7Z6A9 289 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 TTC30AQ86WT1 665 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 CEP57Q86XR8 500 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 PHF13Q86YI8 300 aaPredicted RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 FUKQ8N0W3 1084 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 THEM5Q8N1Q8 247 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 FIBCD1Q8N539 461 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 UBA3Q8TBC4 463 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 MYCBPAPQ8TBZ2 947 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 SLC2A14Q8TDB8 520 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 PPP1R13BQ96KQ4 1090 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 RNPC3Q96LT9 517 aaKnown RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 HNRNPABQ99729 332 aaKnown RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 GDF15Q99988 308 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 SYT15Q9BQS2 421 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 B3GNT5Q9BYG0 378 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 ZCWPW1Q9H0M4 648 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 PDCL3Q9H2J4 239 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 MTIF3Q9H2K0 278 aaKnown RBP7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 C12orf49Q9H741 205 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 C11orf16Q9NQ32 467 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 CHST7Q9NS84 486 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 TMLHEQ9NVH6 421 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 SPG21Q9NZD8 308 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 GTF3C4Q9UKN8 822 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 TSPAN16Q9UKR8 245 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 DUSP10Q9Y6W6 482 aa7.44□□□□□ -1.22
LSM3P3-201ENST00000436601 LTBP2Q14767 1821 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 ALPK3Q96L96 1907 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 M0QYV0 167 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 TULP2O00295 520 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 PJA2O43164 708 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF500O60304 480 aaPredicted RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 IPO7O95373 1038 aaKnown RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 TMEM253P0C7T8 217 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 MYOGP15173 224 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 MMP8P22894 467 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 ADORA2BP29275 332 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 STILQ15468 1287 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 CTXN3Q4LDR2 81 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 C2CD6Q53TS8 623 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 PRSS55Q6UWB4 352 aaPredicted RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 MMS22LQ6ZRQ5 1243 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 MON1BQ7L1V2 547 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 KIAA1328Q86T90 577 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 DDX53Q86TM3 631 aaKnown RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 MCOLN2Q8IZK6 566 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 ANKRD52Q8NB46 1076 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 TMEM35BQ8NCS4 154 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 C1orf131Q8NDD1 294 aaKnown RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 SLC35F5Q8WV83 523 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 SECISBP2LQ93073 1101 aaKnown RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 MYLPFQ96A32 169 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 CCDC74AQ96AQ1 378 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 ARHGEF26Q96DR7 871 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 PCED1BQ96HM7 432 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 HSH2DQ96JZ2 352 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 TTPALQ9BTX7 342 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 HERC2P3Q9BVR0 1158 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 UBE2OQ9C0C9 1292 aaKnown RBP7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF518BQ9C0D4 1074 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 DNAI2Q9GZS0 605 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 THAP2Q9H0W7 228 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 LZTFL1Q9NQ48 299 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 AAASQ9NRG9 546 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 SALL4Q9UJQ4 1053 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 INTUQ9ULD6 942 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 PCDHB12Q9Y5F1 795 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 DNAH12Q6ZR08 3092 aa7.43□□□□□ -1.22
LSM3P3-201ENST00000436601 TCRBV5S1A1TA0A578 114 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 LINC01553A4QN01 128 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ANKRD62A6NC57 917 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 OR6C75A6NL08 312 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 BTNL10A8MVZ5 291 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 H7C4K7 107 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TNFRSF10AO00220 468 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CAPN5O15484 640 aaPredicted RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ADAM12O43184 909 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CCP110O43303 1012 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 BEST1O76090 585 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 FGF18O76093 207 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 SOD2P04179 222 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ERBB2P04626 1255 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CYP1A2P05177 515 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ABCB4P21439 1286 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 RRM1P23921 792 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 MSNP26038 577 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms