RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 TMEM59LQ9UK28 342 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 USP3Q9Y6I4 520 aa24.17■■□□□ 1.46
CPSF4-204ENST00000436336 LAMA2P24043 3122 aaKnown RBP24.16■■□□□ 1.46
CPSF4-204ENST00000436336 FSCN2O14926 492 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 SART1O43290 800 aaKnown RBP24.16■■□□□ 1.46
CPSF4-204ENST00000436336 ADH1AP07327 375 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 RFC1P35251 1148 aaPredicted RBP24.16■■□□□ 1.46
CPSF4-204ENST00000436336 GPR15P49685 360 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 MESDQ14696 234 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 PLPP4Q5VZY2 271 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 ARCQ7LC44 396 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 NUP93Q8N1F7 819 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 JOSD2Q8TAC2 188 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 FNIP1Q8TF40 1166 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 TRIM7Q9C029 511 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 ASNSD1Q9NWL6 643 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 IP6K2Q9UHH9 426 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 JRKLQ9Y4A0 524 aa24.16■■□□□ 1.46
CPSF4-204ENST00000436336 LPXNO60711 386 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 ZBED1O96006 694 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 CASQ1P31415 396 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 DAOAP59103 153 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 PM20D1Q6GTS8 502 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 IRGQQ8WZA9 623 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 KHSRPQ92945 711 aaKnown RBP eCLIP24.15■■□□□ 1.46
CPSF4-204ENST00000436336 SLC28A3Q9HAS3 691 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 C2orf71A6NGG8 1288 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 SEC24AO95486 1093 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 GLI1P08151 1106 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 CAMK1Q14012 370 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 DNTTIP2Q5QJE6 756 aaKnown RBP24.15■■□□□ 1.46
CPSF4-204ENST00000436336 PDE12Q6L8Q7 609 aaKnown RBP24.15■■□□□ 1.46
CPSF4-204ENST00000436336 CYP4F11Q9HBI6 524 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 ALG6Q9Y672 507 aa24.15■■□□□ 1.46
CPSF4-204ENST00000436336 PDE4DIPQ5VU43 2346 aa24.14■■□□□ 1.46
CPSF4-204ENST00000436336 HSF2BPO75031 334 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 SOAT2O75908 522 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 PROSCO94903 275 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 USP17L7P0C7H9 530 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 ELF1P32519 619 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 TAF5Q15542 800 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 SDHAF4Q5VUM1 108 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 TCEAL8Q8IYN2 117 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 EMC1Q8N766 993 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 MICAL1Q8TDZ2 1067 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 UBE2Q2Q8WVN8 375 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 NAPGQ99747 312 aaPredicted RBP24.14■■□□□ 1.45
CPSF4-204ENST00000436336 GOLPH3Q9H4A6 298 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 COMMD8Q9NX08 183 aa24.14■■□□□ 1.45
CPSF4-204ENST00000436336 TMEM110-MUSTN1A8MSY1 372 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 HIDE1A8MVS5 230 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 FANCGO15287 622 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 GRAP2O75791 330 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 RNASE9P60153 205 aaKnown RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 OGDHQ02218 1023 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 PIGHQ14442 188 aaPredicted RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 DENND5BQ6ZUT9 1274 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 PEX26Q7Z412 305 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 KIF18AQ8NI77 898 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 SCAMP5Q8TAC9 235 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 ZNF592Q92610 1267 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 PRO3102Q9H379 93 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 FBXO44Q9H4M3 255 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 RRAGDQ9NQL2 400 aaPredicted RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 IL37Q9NZH6 218 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 AMFRQ9UKV5 643 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 COL4A4P53420 1690 aaPredicted RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 CTAGE9A4FU28 777 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 C2CD4BA6NLJ0 364 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 RTN3O95197 1032 aaPredicted RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 FTCDO95954 541 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 ATF6P18850 670 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 GPD1P21695 349 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 KLRC2P26717 231 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 MAN1A1P33908 653 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 FLT3P36888 993 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 SLC1A1P43005 524 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 MEI1Q5TIA1 1274 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 NT5DC3Q86UY8 548 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 NIPA2Q8N8Q9 360 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 NDRG1Q92597 394 aaKnown RBP24.13■■□□□ 1.45
CPSF4-204ENST00000436336 FAM149B1Q96BN6 582 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 CERS4Q9HA82 394 aa24.13■■□□□ 1.45
CPSF4-204ENST00000436336 TGM5O43548 720 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 IRS1P35568 1242 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 YWHAZP63104 245 aaKnown RBP24.12■■□□□ 1.45
CPSF4-204ENST00000436336 SMAD3P84022 425 aaKnown RBP24.12■■□□□ 1.45
CPSF4-204ENST00000436336 ZNF252P-AS1Q0IIN9 211 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 LILRA6Q6PI73 481 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 CHRDL2Q6WN34 429 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 BHLHA9Q7RTU4 235 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 RXFP2Q8WXD0 754 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 LMAN2LQ9H0V9 348 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 YIPF1Q9Y548 306 aa24.12■■□□□ 1.45
CPSF4-204ENST00000436336 YJEFN3A6XGL0 299 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 E7ENQ6 273 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 PRRG1O14668 218 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 ENC1O14682 589 aa24.11■■□□□ 1.45
CPSF4-204ENST00000436336 DAB1O75553 588 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms