RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ITGA8P53708 1063 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 PMS2P54278 862 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 MAP3K7CLP57077 242 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 OTUD4Q01804 1114 aaKnown RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 ZC3H12AQ5D1E8 599 aaKnown RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 SYDE1Q6ZW31 735 aaPredicted RBP17.45■□□□□ 0.38
USHBP1-203ENST00000431146 ECHDC2Q86YB7 292 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 PWWP2AQ96N64 755 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 SYT15Q9BQS2 421 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 EPB41L4BQ9H329 900 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 CENPHQ9H3R5 247 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 KRT82Q9NSB4 513 aa17.45■□□□□ 0.38
USHBP1-203ENST00000431146 XPO1O14980 1071 aaKnown RBP17.44■□□□□ 0.38
USHBP1-203ENST00000431146 ITGB1P05556 798 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 NPR3P17342 541 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 YY1P25490 414 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 CHKAP35790 457 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 SNX16P57768 344 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 CLEC20AQ6ZU45 233 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 B4GALNT4Q76KP1 1039 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 ZDHHC17Q8IUH5 632 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 SLAIN1Q8ND83 568 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 ACTL9Q8TC94 416 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 RHOBTB2Q9BYZ6 727 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 DNAI2Q9GZS0 605 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 SEMA4AQ9H3S1 761 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 WHRNQ9P202 907 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 GOLGA8KD6RF30 607 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 DPYSL4O14531 572 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 GNRH1P01148 92 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 KLRC2P26717 231 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 GBP1P32455 592 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 RPL9P32969 192 aaKnown RBP17.44■□□□□ 0.38
USHBP1-203ENST00000431146 RPL34P49207 117 aaKnown RBP17.44■□□□□ 0.38
USHBP1-203ENST00000431146 VCPP55072 806 aaKnown RBP17.44■□□□□ 0.38
USHBP1-203ENST00000431146 HDAC4P56524 1084 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 ZNF844Q08AG5 666 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 TAZQ16635 292 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 CA9Q16790 459 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 DNAJC21Q5F1R6 531 aaKnown RBP17.44■□□□□ 0.38
USHBP1-203ENST00000431146 SLC26A9Q7LBE3 791 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 UHMK1Q8TAS1 419 aaKnown RBP17.44■□□□□ 0.38
USHBP1-203ENST00000431146 FAM149B1Q96BN6 582 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 PGBD4Q96DM1 585 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 MAGEB5Q9BZ81 275 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 TMEM30AQ9NV96 361 aa17.44■□□□□ 0.38
USHBP1-203ENST00000431146 PECAM1P16284 738 aaPredicted RBP17.43■□□□□ 0.38
USHBP1-203ENST00000431146 ITIH2P19823 946 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 LHX1P48742 406 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 CACNA2D1P54289 1103 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 DPYSL3Q14195 570 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 OASLQ15646 514 aaKnown RBP17.43■□□□□ 0.38
USHBP1-203ENST00000431146 SKIDA1Q1XH10 827 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 FAM182AQ5T1J6 154 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 NPNTQ6UXI9 565 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 BBS12Q6ZW61 710 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 ZNF598Q86UK7 904 aaKnown RBP17.43■□□□□ 0.38
USHBP1-203ENST00000431146 TMEM86AQ8N2M4 240 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 LINC01599Q8WXQ3 324 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 HSFY1Q96LI6 401 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 KCNK16Q96T55 309 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 TSEN34Q9BSV6 310 aaKnown RBP17.43■□□□□ 0.38
USHBP1-203ENST00000431146 CALCOCO1Q9P1Z2 691 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 TSC2P49815 1807 aa17.43■□□□□ 0.38
USHBP1-203ENST00000431146 SGK1O00141 431 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 B4GALT3O60512 393 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 IFNB1P01574 187 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 SHBGP04278 402 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 ACADSBP45954 432 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 SLC8A3P57103 927 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 GRIK3Q13003 919 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 P3H1Q32P28 736 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 CD300LGQ6UXG3 332 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 CTU1Q7Z7A3 348 aaKnown RBP17.42■□□□□ 0.38
USHBP1-203ENST00000431146 ALLCQ8N6M5 410 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 SNRNP25Q9BV90 132 aaKnown RBP17.42■□□□□ 0.38
USHBP1-203ENST00000431146 AAASQ9NRG9 546 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 ANAPC5Q9UJX4 755 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 FAM200BP0CF97 657 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 ARSEP51690 589 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 GDF10P55107 478 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 KRT81Q14533 505 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 IZUMO3Q5VZ72 239 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 DRICH1Q6PGQ1 229 aaPredicted RBP17.42■□□□□ 0.38
USHBP1-203ENST00000431146 RHBDF2Q6PJF5 856 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 LRIG3Q6UXM1 1119 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 FAM35AQ86V20 835 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 CCDC89Q8N998 374 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 SLC43A3Q8NBI5 491 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 SLC35B2Q8TB61 432 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 TBCBQ99426 244 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 RTP3Q9BQQ7 232 aa17.42■□□□□ 0.38
USHBP1-203ENST00000431146 PABPC3Q9H361 631 aaKnown RBP17.42■□□□□ 0.38
USHBP1-203ENST00000431146 ARVCFO00192 962 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 AP1G2O75843 785 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 LMAN1P49257 510 aa17.41■□□□□ 0.38
USHBP1-203ENST00000431146 PITX1P78337 314 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms