RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PPP1R10Q96QC0 940 aaKnown RBP16.98■□□□□ 0.31
RIF1-204ENST00000430328 CIDEBQ9UHD4 219 aa16.98■□□□□ 0.31
RIF1-204ENST00000430328 MAFFQ9ULX9 164 aa16.98■□□□□ 0.31
RIF1-204ENST00000430328 ALDH3A2P51648 485 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 CYP24A1Q07973 514 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 CITED4Q96RK1 184 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 STK33Q9BYT3 514 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 LIN7AO14910 233 aaPredicted RBP16.97■□□□□ 0.31
RIF1-204ENST00000430328 VCLP18206 1134 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 SNX17Q15036 470 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 PLCL1Q15111 1095 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 RASA2Q15283 850 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 NAPEPLDQ6IQ20 393 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 SPPL2AQ8TCT8 520 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 RUVBL2Q9Y230 463 aaKnown RBP16.97■□□□□ 0.31
RIF1-204ENST00000430328 TTC26A0AVF1 554 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 SMYD1Q8NB12 490 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 S100ZQ8WXG8 99 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 BHLHE41Q9C0J9 482 aaPredicted RBP16.97■□□□□ 0.31
RIF1-204ENST00000430328 ARHGEF11O15085 1522 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 VPS26AO75436 327 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 HLA-DQA2P01906 255 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 TGM2P21980 687 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 CLOCKO15516 846 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 GLRA3O75311 464 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 POLNQ7Z5Q5 900 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 OSCP1Q8WVF1 389 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 MYLPFQ96A32 169 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 C9orf16Q9BUW7 83 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 UGT2B28Q9BY64 529 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 CHMP1AQ9HD42 196 aaPredicted RBP16.97■□□□□ 0.31
RIF1-204ENST00000430328 CHORDC1Q9UHD1 332 aaPredicted RBP16.97■□□□□ 0.31
RIF1-204ENST00000430328 HS6ST1O60243 411 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 PNPLA8Q9NP80 782 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 PRKAG3Q9UGI9 489 aa16.97■□□□□ 0.31
RIF1-204ENST00000430328 PCNAP12004 261 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 CASP5P51878 434 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 CEBPGP53567 150 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 NME5P56597 212 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 POLD3Q15054 466 aaPredicted RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 ZMYM1Q5SVZ6 1142 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 GPC6Q9Y625 555 aaPredicted RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 ADCY6O43306 1168 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 ATF4P18848 351 aaPredicted RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 SKIV2LQ15477 1246 aaKnown RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 EXOC3L1Q86VI1 746 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 POC5Q8NA72 575 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 PIK3C3Q8NEB9 887 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 RAD54LQ92698 747 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 TAGLN3Q9UI15 199 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 TMEM114B3SHH9 223 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 PSIP1O75475 530 aaKnown RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 PRLP01236 227 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 A0A1W2PQC6 194 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 GNB5O14775 395 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 PTGER2P43116 358 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 CCNI2Q6ZMN8 369 aaPredicted RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 HPS6Q86YV9 775 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 PPIL6Q8IXY8 311 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 MCEEQ96PE7 176 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 LNPEPQ9UIQ6 1025 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 FAM50BQ9Y247 325 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
RIF1-204ENST00000430328 GCP02774 474 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 PSMC5P62195 406 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 SEPHS2Q99611 448 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
RIF1-204ENST00000430328 CLRN2A0PK11 232 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 INPP4BO15327 924 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 CDH3P22223 829 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 HOXC9P31274 260 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 FAM220AQ7Z4H9 259 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 ZDHHC13Q8IUH4 622 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 FAM111AQ96PZ2 611 aa16.96■□□□□ 0.3
RIF1-204ENST00000430328 AGO2Q9UKV8 859 aaKnown RBP16.96■□□□□ 0.3
RIF1-204ENST00000430328 ZNF432O94892 652 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 TTKP33981 857 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 HIRAP54198 1017 aaPredicted RBP16.95■□□□□ 0.3
RIF1-204ENST00000430328 NR1D2Q14995 579 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 NSMCE2Q96MF7 247 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 RMDN3Q96TC7 470 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 DGCR6LQ9BY27 220 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 EHD1Q9H4M9 534 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 PPIEQ9UNP9 301 aaKnown RBP16.95■□□□□ 0.3
RIF1-204ENST00000430328 PRKAR2AP13861 404 aaKnown RBP16.95■□□□□ 0.3
RIF1-204ENST00000430328 MSR1P21757 451 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 GCLCP48506 637 aaPredicted RBP16.95■□□□□ 0.3
RIF1-204ENST00000430328 GSSP48637 474 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 CHRNDQ07001 517 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 SLC29A2Q14542 456 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 PLA2G4FQ68DD2 849 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 MRNIPQ6NTE8 343 aa16.95■□□□□ 0.3
RIF1-204ENST00000430328 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
RIF1-204ENST00000430328 MDM4O15151 490 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms