RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 RPL22P35268 128 aaKnown RBP10.59□□□□□ -0.71
RPE-206ENST00000429921 TAF6P49848 677 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 MAP3K7CLP57077 242 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 SLC6A3Q01959 620 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 QPCTQ16769 361 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 PKDCCQ504Y2 493 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 FNBP1LQ5T0N5 605 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 DARS2Q6PI48 645 aaKnown RBP10.59□□□□□ -0.71
RPE-206ENST00000429921 HFE2Q6ZVN8 426 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 FAM131BQ86XD5 332 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 CCDC185Q8N715 623 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 ANKRD42Q8N9B4 389 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 GSTCDQ8NEC7 633 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 RSAD2Q8WXG1 361 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 SLCO2A1Q92959 643 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
RPE-206ENST00000429921 H7C0C1 242 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 RBP3P10745 1247 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 YY1P25490 414 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 SDC4P31431 198 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 MAGEA4P43358 317 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 ATP5OP48047 213 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 BASP1P80723 227 aaKnown RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 ADIGQ0VDE8 80 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 IFRD2Q12894 506 aaPredicted RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 DPYSL3Q14195 570 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 SLMAPQ14BN4 828 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 EFTUD2Q15029 972 aaKnown RBP eCLIP10.58□□□□□ -0.726e-7■■■■■ 47.1
RPE-206ENST00000429921 PTGISQ16647 500 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 LRRC38Q5VT99 294 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 HIBCHQ6NVY1 386 aaPredicted RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 PPP1R2P3Q6NXS1 205 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 ZBED8Q8IZ13 594 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 CCDC89Q8N998 374 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 RUNDC3BQ96NL0 473 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 CNPY3Q9BT09 278 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 MTG1Q9BT17 334 aaPredicted RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 SNRNP25Q9BV90 132 aaKnown RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 DHX35Q9H5Z1 703 aaKnown RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 KCNK9Q9NPC2 374 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 TMEM30AQ9NV96 361 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 WDR35Q9P2L0 1181 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 GTF2IRD1Q9UHL9 959 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 TRPM7Q96QT4 1865 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 MYBPHLA2RUH7 354 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 M0QZ92 97 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 DNALI1O14645 258 aaPredicted RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 TTC4O95801 387 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 NUDT17P0C025 328 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 IL4RP24394 825 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 BRCC3P46736 316 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 HDAC4P56524 1084 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 PDIA2Q13087 525 aaKnown RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 NME3Q13232 169 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 PIGZQ86VD9 579 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 TAX1BP1Q86VP1 789 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 SLC35B2Q8TB61 432 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 SOCS4Q8WXH5 440 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 TBCBQ99426 244 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 KATNAL1Q9BW62 490 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 SLC4A5Q9BY07 1137 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 CEP41Q9BYV8 373 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 VPS37BQ9H9H4 285 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 FAM105AQ9NUU6 356 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 SLC12A6Q9UHW9 1150 aa10.58□□□□□ -0.72
RPE-206ENST00000429921 TPX2Q9ULW0 747 aaKnown RBP10.58□□□□□ -0.72
RPE-206ENST00000429921 ARL5CA6NH57 179 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TRIM66O15016 1216 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 FCGRTP55899 365 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 HTRA3P83110 453 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 AGBL2Q5U5Z8 902 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 MFSD14CQ5VZR4 134 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 PAQR9Q6ZVX9 377 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 GPRIN1Q7Z2K8 1008 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 EXOC3L1Q86VI1 746 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 FUKQ8N0W3 1084 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 LRRC52Q8N7C0 313 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 B3GALNT2Q8NCR0 500 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 CMASQ8NFW8 434 aaPredicted RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 GDAP1Q8TB36 358 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 TLCD1Q96CP7 247 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 SENP8Q96LD8 212 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 KIF9Q9HAQ2 790 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 ETNK2Q9NVF9 386 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 PIH1D1Q9NWS0 290 aaKnown RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 FEZ2Q9UHY8 353 aaPredicted RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 PADI3Q9ULW8 664 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TRPV2Q9Y5S1 764 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TMEM88BA6NKF7 163 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 CA12O43570 354 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 CD4P01730 458 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 GNAT1P11488 350 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 SSTR1P30872 391 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TMED2Q15363 201 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms