RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 KCNK1O00180 336 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 TJP3O95049 919 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SLC25A27O95847 323 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 AMHP03971 560 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SMIM10L2AP0DMW4 78 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SMIM10L2BP0DMW5 78 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 KDELR1P24390 212 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 RPA3P35244 121 aaPredicted RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 GPD2P43304 727 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SCTRP47872 440 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 AP3M2P53677 418 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SLMAPQ14BN4 828 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SOWAHAQ2M3V2 549 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 DCAF6Q58WW2 860 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 TFDP3Q5H9I0 405 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 GKAP1Q5VSY0 366 aaPredicted RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 CYB5D1Q6P9G0 228 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 PRPF39Q86UA1 669 aaKnown RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 SPATS2Q86XZ4 545 aaKnown RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 PALM2Q8IXS6 379 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 NME8Q8N427 588 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 AGR3Q8TD06 166 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 MED10Q9BTT4 135 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 CXorf56Q9H5V9 222 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 GBA2Q9HCG7 927 aaPredicted RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 XPO7Q9UIA9 1087 aaKnown RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 TPX2Q9ULW0 747 aaKnown RBP8.75□□□□□ -1.01
CD44-208ENST00000428726 CNTN6Q9UQ52 1028 aa8.75□□□□□ -1.01
CD44-208ENST00000428726 PRPSAP2O60256 369 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 MMP3P08254 477 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 FOXN2P32314 431 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 MAN1A1P33908 653 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 VSTM1Q6UX27 236 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 FAM228AQ86W67 206 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 PHF13Q86YI8 300 aaPredicted RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 MPP5Q8N3R9 675 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 CCDC185Q8N715 623 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 USP33Q8TEY7 942 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 FBXO41Q8TF61 875 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 PYROXD1Q8WU10 500 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 NUP205Q92621 2012 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 CHMP6Q96FZ7 201 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 L3MBTL3Q96JM7 780 aaPredicted RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 FAM167AQ96KS9 214 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 TMEM237Q96Q45 408 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 GAD1Q99259 594 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 MPHOSPH6Q99547 160 aaKnown RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 MECRQ9BV79 373 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 SCINQ9Y6U3 715 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 GLTPD2A6NH11 291 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 CILPO75339 1184 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 ELNP15502 786 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 KRT4P19013 534 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 TKTP29401 623 aaKnown RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 PBX3P40426 434 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 MLH1P40692 756 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 MAP3K7CLP57077 242 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 SESN2P58004 480 aaPredicted RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 WSCD1Q658N2 575 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 SYDE1Q6ZW31 735 aaPredicted RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 TLK2Q86UE8 772 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 EXOC8Q8IYI6 725 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 CNPY4Q8N129 248 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 PPM1NQ8N819 430 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 FBF1Q8TES7 1133 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 FAF2Q96CS3 445 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 B3GALT6Q96L58 329 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 PPP1R36Q96LQ0 422 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 TGS1Q96RS0 853 aaKnown RBP8.74□□□□□ -1.01
CD44-208ENST00000428726 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 SIK2Q9H0K1 926 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 SLC17A7Q9P2U7 560 aa8.74□□□□□ -1.01
CD44-208ENST00000428726 PAPSS1O43252 624 aaPredicted RBP8.73□□□□□ -1.01
CD44-208ENST00000428726 CALB1P05937 261 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 OR4Q2P0C623 313 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 DRD4P21917 467 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 CETN2P41208 172 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 ELK3P41970 407 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 KCNJ2P63252 427 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 HTRA3P83110 453 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
CD44-208ENST00000428726 LAMC2Q13753 1193 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 SLC1A5Q15758 541 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 CNGA2Q16280 664 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 ZNF792Q3KQV3 632 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 ANKRD20A8PQ5CZ79 823 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 CST9Q5W186 159 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.01
CD44-208ENST00000428726 FUKQ8N0W3 1084 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 GRK7Q8WTQ7 553 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 TTC17Q96AE7 1141 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 PGM2Q96G03 612 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 RMDN2Q96LZ7 410 aa8.73□□□□□ -1.01
CD44-208ENST00000428726 MYCBPQ99417 103 aaPredicted RBP8.73□□□□□ -1.01
CD44-208ENST00000428726 NCAPGQ9BPX3 1015 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms