RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SPATA31C1P0DKV0 1188 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 PTPN2P17706 415 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 ITGAXP20702 1163 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 L1CAMP32004 1257 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 CYP2J2P51589 502 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 TXNL4AP83876 142 aaKnown RBP16.71■□□□□ 0.27
C9orf3-206ENST00000428313 SPIRE1Q08AE8 756 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 TUBB3Q13509 450 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 MYBPC2Q14324 1141 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 NDUFA5Q16718 116 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 KCTD17Q8N5Z5 321 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 PIGBQ92521 554 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 CMTM5Q96DZ9 223 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
C9orf3-206ENST00000428313 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-206ENST00000428313 RBBP6Q7Z6E9 1792 aaKnown RBP16.71■□□□□ 0.27
C9orf3-206ENST00000428313 CYP3A7-CYP3A51PA0A087WV96 503 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SULT1C4O75897 302 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 PROSCO94903 275 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 ZBTB11O95625 1053 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-206ENST00000428313 INHBBP09529 407 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 BMP3P12645 472 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 CYP3A7P24462 503 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 DCAF6Q58WW2 860 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 TCHHL1Q5QJ38 904 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-206ENST00000428313 IL23RQ5VWK5 629 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 METTL21CQ5VZV1 264 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 STXBP4Q6ZWJ1 553 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SLC47A2Q86VL8 602 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 DEFB107AQ8IZN7 70 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SAMD3Q8N6K7 520 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 HM13Q8TCT9 377 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 NLRP7Q8WX94 980 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 DNPEPQ9ULA0 475 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 CYP11B1P15538 503 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 CDKL1Q00532 357 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 COG2Q14746 738 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 ITPRIPL1Q6GPH6 555 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
C9orf3-206ENST00000428313 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SLC44A1Q8WWI5 657 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SHC3Q92529 594 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
C9orf3-206ENST00000428313 ISOC1Q96CN7 298 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 TRIM11Q96F44 468 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 CSRNP1Q96S65 589 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 OLFM1Q99784 485 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 ATAD3AQ9NVI7 634 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 MKS1Q9NXB0 559 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 ATF5Q9Y2D1 282 aaPredicted RBP16.7■□□□□ 0.26
C9orf3-206ENST00000428313 PLLPQ9Y342 182 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SNCAIPQ9Y6H5 919 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 IKBKGQ9Y6K9 419 aa16.7■□□□□ 0.26
C9orf3-206ENST00000428313 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 MEIS1O00470 390 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 BANF1O75531 89 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 SLITRK3O94933 977 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 MYL4P12829 197 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 NMT1P30419 496 aaKnown RBP16.69■□□□□ 0.26
C9orf3-206ENST00000428313 CHI3L2Q15782 390 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 MOXD1Q6UVY6 613 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 APBB2Q92870 758 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 EBF4Q9BQW3 602 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 TRIM56Q9BRZ2 755 aaKnown RBP16.69■□□□□ 0.26
C9orf3-206ENST00000428313 GCOM2Q9BZD3 368 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-206ENST00000428313 IKZF4Q9H2S9 585 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 B3GNT3Q9Y2A9 372 aa16.69■□□□□ 0.26
C9orf3-206ENST00000428313 H3BNH8 94 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 PMM2O15305 246 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 FAM13AO94988 1023 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 LDHAP00338 332 aaKnown RBP16.68■□□□□ 0.26
C9orf3-206ENST00000428313 ETS1P14921 441 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 SPOPLQ6IQ16 392 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 DENND5BQ6ZUT9 1274 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 GPR141Q7Z602 305 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 PALM2Q8IXS6 379 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 PPIL6Q8IXY8 311 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 FAM84BQ96KN1 310 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-206ENST00000428313 NSMCE3Q96MG7 304 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 GID8Q9NWU2 228 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 SEL1LQ9UBV2 794 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 STK39Q9UEW8 545 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 MYRFQ9Y2G1 1151 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 MCF2LO15068 1137 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 SIN3BO75182 1162 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 KITP10721 976 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 NOVP48745 357 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 STAT2P52630 851 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 FAAP100Q0VG06 881 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 ZBED5Q49AG3 693 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 PARP10Q53GL7 1025 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 CES4AQ5XG92 561 aa16.68■□□□□ 0.26
C9orf3-206ENST00000428313 NANOGP8Q6NSW7 305 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms