RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 PKMYT1Q99640 499 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 LMCD1Q9NZU5 365 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 LRFN2Q9ULH4 789 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 NR2E1Q9Y466 385 aa18.84■□□□□ 0.61
AC055811.2-201ENST00000427497 GATMP50440 423 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 ZNF143P52747 638 aaPredicted RBP18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 INTS6LQ5JSJ4 861 aaKnown RBP18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 OVOS1Q6IE37 1185 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 C8orf74Q6P047 294 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 CLEC20AQ6ZU45 233 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 FAM35AQ86V20 835 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 PIGZQ86VD9 579 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 EXD1Q8NHP7 514 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 KCTD13Q8WZ19 329 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 NRDE2Q9H7Z3 1164 aa18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 ARGLU1Q9NWB6 273 aaPredicted RBP18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 FNDC1Q4ZHG4 1894 aaPredicted RBP18.83■□□□□ 0.61
AC055811.2-201ENST00000427497 CCDC151A5D8V7 595 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 DPYSL4O14531 572 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 FSCN2O14926 492 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 LRCH4O75427 683 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 BEST1O76090 585 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 GPD1P21695 349 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 FLT3P36888 993 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 OR1G1P47890 313 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 CLCN6P51797 869 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SLC8A3P57103 927 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 VSNL1P62760 191 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 BRD3Q15059 726 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SLC26A9Q7LBE3 791 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 ARCQ7LC44 396 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 ZDHHC14Q8IZN3 488 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 FBXO22Q8NEZ5 403 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 HDAC7Q8WUI4 952 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 CNPY3Q9BT09 278 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 MED10Q9BTT4 135 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 KRT82Q9NSB4 513 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 DMGDHQ9UI17 866 aaKnown RBP18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 FAM200BP0CF97 657 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SSR1P43307 286 aaKnown RBP18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SLC25A11Q02978 314 aaKnown RBP18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SIX1Q15475 284 aaPredicted RBP18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 PPP2R5EQ16537 467 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 KLHL7Q8IXQ5 586 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 OR10T2Q8NGX3 314 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 RXFP2Q8WXD0 754 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SAMD11Q96NU1 681 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 DDX47Q9H0S4 455 aaKnown RBP18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SLITRK6Q9H5Y7 841 aa18.82■□□□□ 0.6
AC055811.2-201ENST00000427497 SART1O43290 800 aaKnown RBP18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 ZRANB2O95218 330 aaKnown RBP eCLIP18.81■□□□□ 0.67e-11■■■■■ 92.8
AC055811.2-201ENST00000427497 PDGFRAP16234 1089 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 MCM3P25205 808 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 RBM10P98175 930 aaKnown RBP18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 TFF2Q03403 129 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 TAF5Q15542 800 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 TXNRD3NBQ6F5E7 133 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 THEM5Q8N1Q8 247 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 SMOQ99835 787 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 MRPL9Q9BYD2 267 aaKnown RBP18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 ASNSD1Q9NWL6 643 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 STIM2Q9P246 746 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 PRG3Q9Y2Y8 225 aaPredicted RBP18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 PTPRDP23468 1912 aa18.81■□□□□ 0.6
AC055811.2-201ENST00000427497 NCOR1O75376 2440 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 GOLGA6L10A0A0M3HER8 536 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 TCRBV7S2A1N4TA0A589 114 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 NRP1O14786 923 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 RAD51CO43502 376 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 TRAPPC3O43617 180 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 OAZ2O95190 189 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 LCP1P13796 627 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 PCK1P35558 622 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 YWHAHQ04917 246 aaPredicted RBP18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 CYP1B1Q16678 543 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 ATP13A4Q4VNC1 1196 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 ADAT2Q7Z6V5 191 aaKnown RBP18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 RCOR2Q8IZ40 523 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 PRELID2Q8N945 189 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 ZMIZ2Q8NF64 920 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 CLEC4CQ8WTT0 213 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 HNRNPLLQ8WVV9 542 aaKnown RBP18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 MYLPFQ96A32 169 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 SMARCD1Q96GM5 515 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 UBXN6Q9BZV1 441 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 CSNK1G1Q9HCP0 422 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 TMEM30AQ9NV96 361 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 DDX56Q9NY93 547 aaKnown RBP18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 TCF20Q9UGU0 1960 aaKnown RBP18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 BRWD1Q9NSI6 2320 aa18.8■□□□□ 0.6
AC055811.2-201ENST00000427497 SYN3O14994 580 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 GRAP2O75791 330 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 AP1G2O75843 785 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 RNF8O76064 485 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 IL1R2P27930 398 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 MAP3K7CLP57077 242 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 MRPS25P82663 173 aaKnown RBP18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 SLC7A5Q01650 507 aa18.79■□□□□ 0.6
AC055811.2-201ENST00000427497 ADCY1Q08828 1119 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms