RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 TRMT11Q7Z4G4 463 aaKnown RBP13.68□□□□□ -0.22
NELFE-203ENST00000426722 MDGA1Q8NFP4 955 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 SMARCD1Q96GM5 515 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 SPACA7Q96KW9 195 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 TPSD1Q9BZJ3 242 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 CFAP97Q9P2B7 532 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
NELFE-203ENST00000426722 MYO18AQ92614 2054 aaKnown RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 FAM92AA1XBS5 289 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 CLDN5O00501 218 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 C4BPAP04003 597 aaKnown RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 P4HA1P13674 534 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 TRIM21P19474 475 aaKnown RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 KIR2DL1P43626 348 aaPredicted RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 SLC6A11P48066 632 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 CACNA2D1P54289 1103 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 IFRD2Q12894 506 aaPredicted RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 BIRC3Q13489 604 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 ZNF699Q32M78 642 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 BTBD8Q5XKL5 378 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 TMEM92Q6UXU6 159 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 CYP2U1Q7Z449 544 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 CCDC33Q8N5R6 958 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 IL17RCQ8NAC3 791 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 TXNDC5Q8NBS9 432 aaKnown RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 WHAMMQ8TF30 809 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 MED10Q9BTT4 135 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 SLC39A2Q9NP94 309 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 DMAP1Q9NPF5 467 aaPredicted RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 TMEM9BQ9NQ34 198 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 ARHGEF4Q9NR80 690 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
NELFE-203ENST00000426722 EVLQ9UI08 416 aaPredicted RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 TNRC6BQ9UPQ9 1833 aaKnown RBP13.67□□□□□ -0.22
NELFE-203ENST00000426722 CEP192Q8TEP8 1941 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 WDR87Q6ZQQ6 2873 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 LNP1A1A4G5 178 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 C4orf47A7E2U8 309 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 TNFRSF10BO14763 440 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 HOXC11O43248 304 aaPredicted RBP13.66□□□□□ -0.22
NELFE-203ENST00000426722 COCHO43405 550 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 KLF8O95600 359 aaPredicted RBP13.66□□□□□ -0.22
NELFE-203ENST00000426722 RPN1P04843 607 aaKnown RBP13.66□□□□□ -0.22
NELFE-203ENST00000426722 ZDHHC11BP0C7U3 371 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 CSRP1P21291 193 aaKnown RBP13.66□□□□□ -0.22
NELFE-203ENST00000426722 TIE1P35590 1138 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 P2RY2P41231 377 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 DHPSP49366 369 aaPredicted RBP13.66□□□□□ -0.22
NELFE-203ENST00000426722 LMAN2Q12907 356 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 NCOA4Q13772 614 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 SGSM1Q2NKQ1 1148 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 TCEAL6Q6IPX3 200 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 PAQR9Q6ZVX9 377 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 LPCAT2Q7L5N7 544 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 FAM35AQ86V20 835 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 ALLCQ8N6M5 410 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 TAF4BQ92750 862 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 TCEAL3Q969E4 200 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 SNX21Q969T3 373 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 KCNK16Q96T55 309 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 FBXO44Q9H4M3 255 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 CHORDC1Q9UHD1 332 aaPredicted RBP13.66□□□□□ -0.22
NELFE-203ENST00000426722 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 INVSQ9Y283 1065 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 SPTBN2O15020 2390 aa13.66□□□□□ -0.22
NELFE-203ENST00000426722 CACNA1BQ00975 2339 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
NELFE-203ENST00000426722 SGK1O00141 431 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
NELFE-203ENST00000426722 CEACAM1P13688 526 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 BCKDHBP21953 392 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 NOVA1P51513 510 aaKnown RBP13.65□□□□□ -0.22
NELFE-203ENST00000426722 SLC5A3P53794 718 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 CDH8P55286 799 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 CUL4BQ13620 913 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 PSAPL1Q6NUJ1 521 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 C12orf40Q86WS4 652 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 ETFBKMTQ8IXQ9 262 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 PHTF2Q8N3S3 785 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
NELFE-203ENST00000426722 NUSAP1Q9BXS6 441 aaKnown RBP13.65□□□□□ -0.22
NELFE-203ENST00000426722 BACH2Q9BYV9 841 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 SMYD3Q9H7B4 428 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 CSNK1G1Q9HCP0 422 aa13.65□□□□□ -0.22
NELFE-203ENST00000426722 SPHK2Q9NRA0 654 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms