RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 UGT1A7Q9HAW7 530 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 UGT1A10Q9HAW8 530 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 UGT1A8Q9HAW9 530 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 GPATCH2LQ9NWQ4 482 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 MAFBQ9Y5Q3 323 aaPredicted RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 WASF2Q9Y6W5 498 aa7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNFX1Q9P2E3 1918 aaKnown RBP7.85□□□□□ -1.15
SMARCC1-202ENST00000425518 UTRNP46939 3433 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 CXorf49A8MYA2 514 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 INO80B-WBP1J3KQ70 363 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 AMPD1P23109 780 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ETV4P43268 484 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 STAT5BP51692 787 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ALDH18A1P54886 795 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 MAP3K10Q02779 954 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 BST1Q10588 318 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 CHI3L2Q15782 390 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SMAD1Q15797 465 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 NBPF20Q3BBV1 942 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 NUDCD3Q8IVD9 361 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TEKT4Q8WW24 435 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SKA1Q96BD8 255 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 THTPAQ9BU02 230 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 INO80BQ9C086 356 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ACAD9Q9H845 621 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 FETUBQ9UGM5 382 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ZC3H7BQ9UGR2 993 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 F5H423 210 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 CLGNO14967 610 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 OGTO15294 1046 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 MAP3K13O43283 966 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 KRT37O76014 449 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TRUB2O95900 331 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PRKCBP05771 671 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 GJB1P08034 283 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 NEK3P51956 506 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 AP3M2P53677 418 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PRKG1Q13976 671 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 KRT81Q14533 505 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ZRSR2Q15696 482 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 C15orf59Q2T9L4 293 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF667Q5HYK9 610 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 MROH9Q5TGP6 573 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 RNF220Q5VTB9 566 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 OR6B2Q6IFH4 312 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ZCCHC23Q6ZST2 131 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SAMD7Q7Z3H4 446 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC26A11Q86WA9 606 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 AGBL3Q8NEM8 1001 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PPP1R14CQ8TAE6 165 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 E2F7Q96AV8 911 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 HEXIM2Q96MH2 286 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 NLRP4Q96MN2 994 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TEPSINQ96N21 525 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TTC1Q99614 292 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 VCXQ9H320 206 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PICK1Q9NRD5 415 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF214Q9UL59 606 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PCDHGC3Q9UN70 934 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 KAT6AQ92794 2004 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 M0QYV0 167 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 MAP3K7O43318 606 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 CSDE1O75534 798 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SNRPAP09012 282 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 STIP1P31948 543 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ASPAP45381 313 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 AQP5P55064 265 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SPDYAQ5MJ70 313 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TTC39BQ5VTQ0 682 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 XYLT1Q86Y38 959 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TREML1Q86YW5 311 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC25A41Q8N5S1 370 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 CCDC110Q8TBZ0 833 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ANKRD36BP1Q96IX9 119 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TWNKQ96RR1 684 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 DDX50Q9BQ39 737 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TEX13BQ9BXU2 312 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 TMEM134Q9H6X4 195 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 RSAD1Q9HA92 442 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PIDD1Q9HB75 910 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 PCMTD2Q9NV79 361 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 HMGXB4Q9UGU5 601 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 SCOCQ9UIL1 159 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 RPL26L1Q9UNX3 145 aaKnown RBP7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
SMARCC1-202ENST00000425518 MED7O43513 233 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 MSCO60682 206 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 UBTFL6P0CB48 400 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 DHRS4L1P0CG22 281 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 RARBP10826 455 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 CHRM1P11229 460 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 PDGFRAP16234 1089 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 SP100P23497 879 aaPredicted RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC18A2Q05940 514 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ZC3H12AQ5D1E8 599 aaKnown RBP7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ZPBP2Q6X784 338 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ARHGAP24Q8N264 748 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 ZNF280CQ8ND82 737 aa7.83□□□□□ -1.16
SMARCC1-202ENST00000425518 CMASQ8NFW8 434 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms