RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 SOX9P48436 509 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 BCAT1P54687 386 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SLC8A3P57103 927 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 EXOC3L4Q17RC7 722 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TRIM68Q6AZZ1 485 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ANKRD52Q8NB46 1076 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PRSS33Q8NF86 280 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ENOX1Q8TC92 643 aaKnown RBP23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KCNH6Q9H252 994 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 UBE2TQ9NPD8 197 aaPredicted RBP23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TLR8Q9NR97 1041 aaKnown RBP23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SMPD4Q9NXE4 827 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 HESX1Q9UBX0 185 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SCML2Q9UQR0 700 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CPQQ9Y646 472 aa23.56■■□□□ 1.36
PTCHD3P2-201ENST00000424937 RNF225M0QZC1 329 aaPredicted RBP23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 O00370 1275 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PES1O00541 588 aaKnown RBP23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MAN2B1O00754 1011 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ZDHHC11BP0C7U3 371 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KRT5P13647 590 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TARSP26639 723 aaKnown RBP23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SLC7A9P82251 487 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 VWA3BQ502W6 1294 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 HECTD3Q5T447 861 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CAVIN1Q6NZI2 390 aaKnown RBP23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 GJB7Q6PEY0 223 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CCDC105Q8IYK2 499 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PRRX2Q99811 253 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 NDST4Q9H3R1 872 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CCSER2Q9H7U1 834 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MRPS17Q9Y2R5 130 aaKnown RBP23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MTF2Q9Y483 593 aaPredicted RBP23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 WDFY4Q6ZS81 3184 aa23.55■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SHISA7A6NL88 538 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 FAM170BA6NMN3 283 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 LEFTY2O00292 366 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 COCHO43405 550 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 BRD2P25440 801 aaKnown RBP23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PGFP49763 221 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TUBP50607 506 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KIF11P52732 1056 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ZXDBP98169 803 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 APBA1Q02410 837 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 BST2Q10589 180 aaKnown RBP23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TCP11X2Q5H9J9 407 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MIIPQ5JXC2 388 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SNX30Q5VWJ9 437 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PIGZQ86VD9 579 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TFAP2BQ92481 460 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 FAM83CQ9BQN1 747 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 EBF3Q9H4W6 596 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 C8orf33Q9H7E9 229 aaPredicted RBP23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 HPS4Q9NQG7 708 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 APEX2Q9UBZ4 518 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 KIAA1257Q9ULG3 409 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 NDRG2Q9UN36 371 aaKnown RBP23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 WNT6Q9Y6F9 365 aa23.54■■□□□ 1.36
PTCHD3P2-201ENST00000424937 GALR2O43603 387 aaPredicted RBP23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TLR5O60602 858 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CALCAP01258 141 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 GLULP15104 373 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ARSAP15289 507 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TCF3P15923 654 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 EEF1GP26641 437 aaKnown RBP23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PON1P27169 355 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 IFNAR2P48551 515 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ZNF132P52740 706 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 NUBP1P53384 320 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MFAP3P55082 362 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PDE4CQ08493 712 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 PDGFRLQ15198 375 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ITPRIPL2Q3MIP1 535 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ENOSF1Q7L5Y1 443 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 UBA3Q8TBC4 463 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 FAM3CQ92520 227 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MSANTD3Q96H12 275 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 NACA2Q9H009 215 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 DUS2Q9NX74 493 aaKnown RBP23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ARIH1Q9Y4X5 557 aaPredicted RBP23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 MYOFQ9NZM1 2061 aa23.53■■□□□ 1.36
PTCHD3P2-201ENST00000424937 A0A1W2PQH9 124 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SPECC1L-ADORA2AF8WAN1 911 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 M0QYV0 167 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TULP2O00295 520 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 XPO1O14980 1071 aaKnown RBP23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CTHP32929 405 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TYRO3Q06418 890 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 RUNX3Q13761 415 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 ARHGAP44Q17R89 818 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 CCDC186Q7Z3E2 898 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 DTWD2Q8NBA8 298 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 OSCP1Q8WVF1 389 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 FAM81BQ96LP2 452 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 OSBPL6Q9BZF3 934 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 UBXN6Q9BZV1 441 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 TAB2Q9NYJ8 693 aa23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.52■■□□□ 1.36
PTCHD3P2-201ENST00000424937 SETSIPP0DME0 302 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 MLLT6P55198 1093 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms