RNA–Protein interactions for RNA: ENST00000423136.1

GAPDHP55-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 55, humanhuman

BASIC

Gene GAPDHP55, Length 803 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP55-201ENST00000423136 TFAMQ00059 246 aaKnown RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 GTF2BQ00403 316 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 KYAT1Q16773 422 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 MGAT5BQ3V5L5 792 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 PRSS36Q5K4E3 855 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 STXBP5Q5T5C0 1151 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 SPATA1Q5VX52 437 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 C9orf57Q5W0N0 161 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 MRM1Q6IN84 353 aaKnown RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 TSSK4Q6SA08 328 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 C6orf15Q6UXA7 325 aaPredicted RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZNF852Q6ZMS4 543 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 LAPTM4BQ86VI4 370 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 METTL23Q86XA0 190 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 KIAA2013Q8IYS2 634 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 VPS37AQ8NEZ2 397 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 SMARCD2Q92925 531 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 KISS1RQ969F8 398 aaPredicted RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 ELSPBP1Q96BH3 223 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 KCTD15Q96SI1 283 aaPredicted RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 FAM213AQ9BRX8 229 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 NLRC4Q9NPP4 1024 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 DPP3Q9NY33 737 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 CPSF3Q9UKF6 684 aaKnown RBP8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 PHTF1Q9UMS5 762 aa8.12□□□□□ -1.11
GAPDHP55-201ENST00000423136 MYMKA6NI61 221 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 OR6C75A6NL08 312 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 SLC38A8A6NNN8 435 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZNF263O14978 683 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 VNN2O95498 520 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 KRT19P08727 400 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 POU2F2P09086 479 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 PSMC3P17980 439 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 POU3F2P20265 443 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 CYP3A5P20815 502 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 FCARP24071 287 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 TARSP26639 723 aaKnown RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 LRPAP1P30533 357 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 KPNA1P52294 538 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 PRKCQQ04759 706 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 RESTQ13127 1097 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 TBX2Q13207 712 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 PLD1Q13393 1074 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 SLC9A5Q14940 896 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 STK38Q15208 465 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 PTPAQ15257 358 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 TOMM20Q15388 145 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZBTB6Q15916 424 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 SLFN12LQ6IEE8 588 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 CNNM4Q6P4Q7 775 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 C1orf228Q6PIY5 440 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZC3H14Q6PJT7 736 aaKnown RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 VITQ6UXI7 678 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 RTL10Q7L3V2 364 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZNF720Q7Z2F6 126 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 THEM5Q8N1Q8 247 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 DCLK2Q8N568 766 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 FAM160A2Q8N612 972 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 OR10T2Q8NGX3 314 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 LEO1Q8WVC0 666 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ATRIPQ8WXE1 791 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZFYVE19Q96K21 471 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ACCSQ96QU6 501 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 LPIN3Q9BQK8 851 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 SLC4A5Q9BY07 1137 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 CCSER1Q9C0I3 900 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 SMG9Q9H0W8 520 aaKnown RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 EPN3Q9H201 632 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ATXN3LQ9H3M9 355 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 LTB4R2Q9NPC1 389 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ABI2Q9NYB9 513 aaPredicted RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 DLGAP2Q9P1A6 1054 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 FNDC3AQ9Y2H6 1198 aaKnown RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 MRPS17Q9Y2R5 130 aaKnown RBP8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 PIAS3Q9Y6X2 628 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 CACNA1IQ9P0X4 2223 aa8.11□□□□□ -1.11
GAPDHP55-201ENST00000423136 ZNF292O60281 2723 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 NOTCH4Q99466 2003 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 GPR179Q6PRD1 2367 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 MTMR11A4FU01 709 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 HEPACAM2A8MVW5 462 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 NCAM2O15394 837 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 MOSPD3O75425 235 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 PRPF6O94906 941 aaKnown RBP8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 RHOBTB3O94955 611 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 PIGRP01833 764 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 GAP43P17677 238 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 SCP2P22307 547 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 ACAT1P24752 427 aaKnown RBP8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 CCNE1P24864 410 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 GABRR2P28476 465 aa8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 POLR2BP30876 1174 aaKnown RBP8.1□□□□□ -1.11
GAPDHP55-201ENST00000423136 TAF6P49848 677 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms