RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 RHOBTB3O94955 611 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 ASS1P00966 412 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 EIF2DP41214 584 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 ASPAP45381 313 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 CDH8P55286 799 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 DLG4P78352 724 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 ENPEPQ07075 957 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 DHCR24Q15392 516 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 HECTD3Q5T447 861 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 SNX30Q5VWJ9 437 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 CEP135Q66GS9 1140 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 PAQR9Q6ZVX9 377 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 INTS8Q75QN2 995 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 SV2AQ7L0J3 742 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 ACOT1Q86TX2 421 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 KBTBD6Q86V97 674 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 TSTD1Q8NFU3 115 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 USP33Q8TEY7 942 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 OTUB2Q96DC9 234 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 KCNK16Q96T55 309 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 SDCBP2Q9H190 292 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 IL37Q9NZH6 218 aa12.25□□□□□ -0.45
SQSTM1-203ENST00000422245 A0A1W2PQ27 194 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 A0A1W2PQ64 194 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 A0A1W2PQD8 194 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 E2F8A0AVK6 867 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 FAM92AA1XBS5 289 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 TNFRSF10BO14763 440 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 COCHO43405 550 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 HLA-DRAP01903 254 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 ZDHHC11BP0C7U3 371 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 ADH5P11766 374 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 NR2F2P24468 414 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 VAMP7P51809 220 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 NDUFA8P51970 172 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 NDST1P52848 882 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 INCA1Q0VD86 236 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 ELF2Q15723 593 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 GAB4Q2WGN9 574 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 HSF5Q4G112 596 aaPredicted RBP12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 C11orf74Q86VG3 221 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 CRYBG2Q8N1P7 616 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 C12orf50Q8NA57 414 aaPredicted RBP12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 SCAMP5Q8TAC9 235 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 ZC3H10Q96K80 434 aaKnown RBP12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 POLR3BQ9NW08 1133 aaPredicted RBP12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 GMIPQ9P107 970 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 HMGXB4Q9UGU5 601 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 MMP17Q9ULZ9 603 aa12.24□□□□□ -0.45
SQSTM1-203ENST00000422245 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 DCDC2BA2VCK2 349 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 K7EQS6 105 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 SCAMP3O14828 347 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 PRR29P0C7W0 189 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 ZNF806P0C7X5 589 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 FAM200BP0CF97 657 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 KRT13P13646 458 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 CCDC130P13994 396 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 LIMK1P53667 647 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 SEC13P55735 322 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 MRPS21P82921 87 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 DPYDQ12882 1025 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 PLK5Q496M5 336 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 AASDHQ4L235 1098 aaPredicted RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 C1orf220Q5T0J3 134 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 ADGRG2Q8IZP9 1017 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 GUF1Q8N442 669 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 ZMIZ2Q8NF64 920 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 DDX1Q92499 740 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 ELMO3Q96BJ8 720 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 PNKPQ96T60 521 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 SMOQ99835 787 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 DNAI2Q9GZS0 605 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 NIF3L1Q9GZT8 377 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 NACA2Q9H009 215 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 ARRDC1-AS1Q9H2J1 176 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 CYP3A43Q9HB55 503 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 FAM49BQ9NUQ9 324 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 SH3BP1Q9Y3L3 701 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 MYH10P35580 1976 aa12.23□□□□□ -0.45
SQSTM1-203ENST00000422245 HOXC11O43248 304 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 TLR5O60602 858 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 RHOBTB1O94844 696 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 KAT7O95251 611 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 APODP05090 189 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 TRIM49P0CI25 452 aa12.22□□□□□ -0.45
SQSTM1-203ENST00000422245 TRIM49CP0CI26 452 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms