RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 RRAGAQ7L523 313 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 FAM3CQ92520 227 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 RNF38Q9H0F5 515 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 SCML2Q9UQR0 700 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 PCDHB4Q9Y5E5 795 aa27.88■■■□□ 2.05
CDK9-202ENST00000421939 CTHP32929 405 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 TUBP50607 506 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 PDGFRLQ15198 375 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 GOLGA7BQ2TAP0 167 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 ITPRIPL2Q3MIP1 535 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 HECTD3Q5T447 861 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 TRIM68Q6AZZ1 485 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 ANKRD52Q8NB46 1076 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 TTC8Q8TAM2 541 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 HPS4Q9NQG7 708 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 NDRG2Q9UN36 371 aaKnown RBP27.87■■■□□ 2.05
CDK9-202ENST00000421939 CPQQ9Y646 472 aa27.87■■■□□ 2.05
CDK9-202ENST00000421939 SPECC1L-ADORA2AF8WAN1 911 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 CYP26A1O43174 497 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 PAEPP09466 180 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 VDRP11473 427 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 PLA2G5P39877 138 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 KIF11P52732 1056 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 SLC8A3P57103 927 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 ZXDBP98169 803 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 TTC30AQ86WT1 665 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 RALGPS2Q86X27 583 aaPredicted RBP27.86■■■□□ 2.05
CDK9-202ENST00000421939 OSCP1Q8WVF1 389 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 FAM122AQ96E09 287 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 KREMEN1Q96MU8 473 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 CRACR2AQ9BSW2 395 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 EBF3Q9H4W6 596 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 TLR8Q9NR97 1041 aaKnown RBP27.86■■■□□ 2.05
CDK9-202ENST00000421939 SMPD4Q9NXE4 827 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 TSPAN16Q9UKR8 245 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 KIAA1257Q9ULG3 409 aa27.86■■■□□ 2.05
CDK9-202ENST00000421939 LEFTY2O00292 366 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 NCAM2O15394 837 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 COCHO43405 550 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 MBL2P11226 248 aaPredicted RBP27.85■■■□□ 2.05
CDK9-202ENST00000421939 ARSAP15289 507 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 IFNAR2P48551 515 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 BCAT1P54687 386 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 NHLH1Q02575 133 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 RUNX3Q13761 415 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 MAN2A1Q16706 1144 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 CCDC183Q5T5S1 534 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 ZNF687Q8N1G0 1237 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 RBBP8NLQ8NC74 664 aaPredicted RBP27.85■■■□□ 2.05
CDK9-202ENST00000421939 CCSER2Q9H7U1 834 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 DUS2Q9NX74 493 aaKnown RBP27.85■■■□□ 2.05
CDK9-202ENST00000421939 HESX1Q9UBX0 185 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 WNT6Q9Y6F9 365 aa27.85■■■□□ 2.05
CDK9-202ENST00000421939 GTPBP10A4D1E9 387 aaKnown RBP27.84■■■□□ 2.05
CDK9-202ENST00000421939 O00370 1275 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 MAGEA9P43362 315 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 PGFP49763 221 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 HSP90AA4PQ58FG1 418 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 TRIM65Q6PJ69 517 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 GBP6Q6ZN66 633 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 PIGZQ86VD9 579 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 DDX42Q86XP3 938 aaKnown RBP eCLIP27.84■■■□□ 2.05
CDK9-202ENST00000421939 CLDN23Q96B33 292 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 UBXN6Q9BZV1 441 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 IRF2BPLQ9H1B7 796 aa27.84■■■□□ 2.05
CDK9-202ENST00000421939 TLR5O60602 858 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 ZNF132P52740 706 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 EXOC3L4Q17RC7 722 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 TXNDC11Q6PKC3 985 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 SASS6Q6UVJ0 657 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 CCDC186Q7Z3E2 898 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 ATP2A3Q93084 1043 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 NACA2Q9H009 215 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 UBE2TQ9NPD8 197 aaPredicted RBP27.83■■■□□ 2.05
CDK9-202ENST00000421939 USP3Q9Y6I4 520 aa27.83■■■□□ 2.05
CDK9-202ENST00000421939 H0Y858 1186 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 RNF225M0QZC1 329 aaPredicted RBP27.82■■■□□ 2.04
CDK9-202ENST00000421939 XPO1O14980 1071 aaKnown RBP27.82■■■□□ 2.04
CDK9-202ENST00000421939 RPS9P46781 194 aaKnown RBP27.82■■■□□ 2.04
CDK9-202ENST00000421939 BST2Q10589 180 aaKnown RBP27.82■■■□□ 2.04
CDK9-202ENST00000421939 EML3Q32P44 896 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 CPA6Q8N4T0 437 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 KIAA1958Q8N8K9 716 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 TFAP2BQ92481 460 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 TUBGCP2Q9BSJ2 902 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 CYLDQ9NQC7 956 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 CFAP97Q9P2B7 532 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 NFE2L3Q9Y4A8 694 aa27.82■■■□□ 2.04
CDK9-202ENST00000421939 OTOL1A6NHN0 477 aaPredicted RBP27.81■■■□□ 2.04
CDK9-202ENST00000421939 KCNJ18B7U540 433 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 PRKCSHP14314 528 aaPredicted RBP27.81■■■□□ 2.04
CDK9-202ENST00000421939 SLC9A1P19634 815 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 PDE4CQ08493 712 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 FZD5Q13467 585 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 KCNJ12Q14500 433 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 ANGPT1Q15389 498 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 LCLAT1Q6UWP7 414 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 ENOSF1Q7L5Y1 443 aa27.81■■■□□ 2.04
CDK9-202ENST00000421939 ENOX1Q8TC92 643 aaKnown RBP27.81■■■□□ 2.04
CDK9-202ENST00000421939 ZFRQ96KR1 1074 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms