RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RTN2O75298 545 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 RTN3O95197 1032 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 NDUFA10O95299 355 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 FTLP02792 175 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 GZMAP12544 262 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 CYLC1P35663 651 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 LTBRP36941 435 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 ACADSBP45954 432 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 COL19A1Q14993 1142 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 SYCE2Q6PIF2 218 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 FAM183BPQ6ZVS7 135 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 PHLDB2Q86SQ0 1253 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 TMEM110Q86TL2 294 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 ITIH5Q86UX2 942 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 PHF13Q86YI8 300 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 HS6ST3Q8IZP7 471 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 CEP295NLQ96MC4 621 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 ZNF512Q96ME7 567 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 KCNF1Q9H3M0 494 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 CYLDQ9NQC7 956 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 ADAM22Q9P0K1 906 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 ASB3Q9Y575 518 aa16.53■□□□□ 0.24
DDX55-203ENST00000421670 HELZP42694 1942 aaKnown RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 ZBED1O96006 694 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 ABCB4P21439 1286 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 YWHAQP27348 245 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 PTP4A2Q12974 167 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.24
DDX55-203ENST00000421670 CLUL1Q15846 466 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 TMC8Q8IU68 726 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 MSANTD4Q8NCY6 345 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 SMG7Q92540 1137 aaKnown RBP16.52■□□□□ 0.24
DDX55-203ENST00000421670 FBXO32Q969P5 355 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 C18orf8Q96DM3 657 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 DESI2Q9BSY9 194 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 TTLL2Q9BWV7 592 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 PACSIN1Q9BY11 444 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 ISCUQ9H1K1 167 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 IL37Q9NZH6 218 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 EPN1Q9Y6I3 576 aaPredicted RBP16.52■□□□□ 0.24
DDX55-203ENST00000421670 USP3Q9Y6I4 520 aa16.52■□□□□ 0.24
DDX55-203ENST00000421670 NCK2O43639 380 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 GABRB2P47870 512 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 PGFP49763 221 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 DAOAP59103 153 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 NTHL1P78549 312 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 TAF10Q12962 218 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 OR6B2Q6IFH4 312 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 TOGARAM2Q6ZUX3 1019 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 BHLHA9Q7RTU4 235 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 GRASPQ7Z6J2 395 aaPredicted RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 XYLT1Q86Y38 959 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 MCOLN2Q8IZK6 566 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 ACRBPQ8NEB7 543 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 CMASQ8NFW8 434 aaPredicted RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 TRMT2BQ96GJ1 504 aaKnown RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 MYRFLQ96LU7 910 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 FBXO44Q9H4M3 255 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 PIDD1Q9HB75 910 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 CNGB3Q9NQW8 809 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 ASAH2Q9NR71 780 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 GMIPQ9P107 970 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 DNMT3BQ9UBC3 853 aaKnown RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 CHORDC1Q9UHD1 332 aaPredicted RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 NCANO14594 1321 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 FAM92AA1XBS5 289 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 EIF3CLB5ME19 914 aaKnown RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 NRG2O14511 850 aaPredicted RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 ARHGAP6O43182 974 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 TADA3O75528 432 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 LCA5LO95447 670 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 CALB1P05937 261 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 OLFML1Q6UWY5 402 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 ZNF653Q96CK0 615 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 EIF3CQ99613 913 aaKnown RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 LRRC3Q9BY71 257 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 SCML2Q9UQR0 700 aa16.51■□□□□ 0.23
DDX55-203ENST00000421670 REXO2Q9Y3B8 237 aaKnown RBP16.51■□□□□ 0.23
DDX55-203ENST00000421670 YJEFN3A6XGL0 299 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 E7ENQ6 273 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
DDX55-203ENST00000421670 NRDCO43847 1150 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 FBXO21O94952 628 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 PAPLNO95428 1278 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 GJB6O95452 261 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 RHOP08100 348 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 POU2F2P09086 479 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 MYL4P12829 197 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
DDX55-203ENST00000421670 PTPN2P17706 415 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 RRM1P23921 792 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 GABRR2P28476 465 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 CCR2P41597 374 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 GALCP54803 685 aa16.5■□□□□ 0.23
DDX55-203ENST00000421670 MRPS5P82675 430 aaKnown RBP16.5■□□□□ 0.23
DDX55-203ENST00000421670 TAF5Q15542 800 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms