RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZNF518BQ9C0D4 1074 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 CUEDC2Q9H467 287 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 DPEP3Q9H4B8 488 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 AGPAT3Q9NRZ7 376 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 ZFHX4Q86UP3 3567 aa17.93■□□□□ 0.46
UPF3AP3-201ENST00000420996 CEP192Q8TEP8 1941 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 PI4KAP42356 2102 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 A8MXQ7 604 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 C1QTNF9BB2RNN3 333 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 CLDN5O00501 218 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 ADAM23O75077 832 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 C1QTNF9P0C862 333 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 DPP6P42658 865 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 SNRPFP62306 86 aaKnown RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 GAD2Q05329 585 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 IFRD2Q12894 506 aaPredicted RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 E2F4Q16254 413 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 MAP7D1Q3KQU3 841 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 UAP1L1Q3KQV9 507 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 TRIM61Q5EBN2 209 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 LY6G5CQ5SRR4 150 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 CNNM4Q6P4Q7 775 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 SYT12Q8IV01 421 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 TMEFF1Q8IYR6 380 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 PHTF2Q8N3S3 785 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 KDF1Q8NAX2 398 aaPredicted RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 XXYLT1Q8NBI6 393 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 FBXO32Q969P5 355 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 CCDC127Q96BQ5 260 aa17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 ZSCAN16Q9H4T2 348 aaPredicted RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 MBD1Q9UIS9 605 aaPredicted RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 CIZ1Q9ULV3 898 aaPredicted RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 ASCC3Q8N3C0 2202 aaKnown RBP17.92■□□□□ 0.46
UPF3AP3-201ENST00000420996 CLIC2O15247 247 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 COCHO43405 550 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 ATICP31939 592 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 NASPP49321 788 aaPredicted RBP17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 CYP2J2P51589 502 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 ASIC1P78348 528 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 KDSRQ06136 332 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 TRPC3Q13507 836 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 PREPLQ4J6C6 727 aaPredicted RBP17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 FAM26FQ5R3K3 315 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 HECTD3Q5T447 861 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 SNX30Q5VWJ9 437 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 FRMD1Q8N878 549 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 KCNV2Q8TDN2 545 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 HMGB4Q8WW32 186 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 ZNF516Q92618 1163 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 ZFRQ96KR1 1074 aaKnown RBP17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 DUSP9Q99956 384 aaKnown RBP17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 XYLT2Q9H1B5 865 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 TMEM74BQ9NUR3 256 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 NXF1Q9UBU9 619 aaKnown RBP17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 CHD6Q8TD26 2715 aa17.91■□□□□ 0.46
UPF3AP3-201ENST00000420996 TCRBV21S2A2A0A5A6 115 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 SPINK2P20155 84 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 PTGER3P43115 390 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 MYL6P60660 151 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 STK38Q15208 465 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 BTBD8Q5XKL5 378 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 ETFBKMTQ8IXQ9 262 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 PGBD3Q8N328 593 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 LINC00301Q8NCQ3 95 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 DEFB124Q8NES8 71 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 SYAP1Q96A49 352 aaPredicted RBP17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 KCNK16Q96T55 309 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 TMEM121BQ9BXQ6 578 aaPredicted RBP17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 ADAM33Q9BZ11 813 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 IL37Q9NZH6 218 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 CHORDC1Q9UHD1 332 aaPredicted RBP17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 ZMIZ1Q9ULJ6 1067 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 UBE4BO95155 1302 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 FRYQ5TBA9 3013 aa17.9■□□□□ 0.46
UPF3AP3-201ENST00000420996 PCNX2A6NKB5 2137 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 TBC1D3BA6NDS4 549 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 TMEM8BA6NDV4 472 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 HOXC11O43248 304 aaPredicted RBP17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 TOP3BO95985 862 aaKnown RBP17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 ENGP17813 658 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 HOXD12P35452 270 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 TUBP50607 506 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 LYSMD4Q5XG99 296 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SLC23A3Q6PIS1 610 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 NUDT18Q6ZVK8 323 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 ARMCX6Q7L4S7 300 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 TRMT11Q7Z4G4 463 aaKnown RBP17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 IQUBQ8NA54 791 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SCAMP5Q8TAC9 235 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SCFD1Q8WVM8 642 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 DHX58Q96C10 678 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 C7orf25Q9BPX7 421 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SCNM1Q9BWG6 230 aa17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
UPF3AP3-201ENST00000420996 SLC32A1Q9H598 525 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms