RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 MCF2LO15068 1137 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 SMIM10L2AP0DMW4 78 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 SMIM10L2BP0DMW5 78 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 FGFR1P11362 822 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 STX2P32856 288 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 ARL4CP56559 192 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 SLC6A3Q01959 620 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 RASA2Q15283 850 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 C1orf228Q6PIY5 440 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 CATSPER4Q7RTX7 472 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 TRPM8Q7Z2W7 1104 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 AGGF1Q8N302 714 aaeCLIP16.89■□□□□ 0.29
CTSB-203ENST00000420692 TTC39CQ8N584 583 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 PLD5Q8N7P1 536 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 ANKS4BQ8N8V4 417 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 TMEM40Q8WWA1 233 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 LENG1Q96BZ8 264 aaPredicted RBP16.89■□□□□ 0.29
CTSB-203ENST00000420692 DHRS4Q9BTZ2 278 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 MAK16Q9BXY0 300 aaKnown RBP16.89■□□□□ 0.29
CTSB-203ENST00000420692 PHACTR1Q9C0D0 580 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 GGT7Q9UJ14 662 aa16.89■□□□□ 0.29
CTSB-203ENST00000420692 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
CTSB-203ENST00000420692 A6NJR5 290 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 H0YHG0 523 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 SPTLC1O15269 473 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 PRPF4O43172 522 aaKnown RBP eCLIP16.88■□□□□ 0.297e-14■■□□□ 13.1
CTSB-203ENST00000420692 DYNC1LI2O43237 492 aaPredicted RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 PRPSAP2O60256 369 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 AKAP5P24588 427 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 ZKSCAN8Q15776 578 aaPredicted RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 C9orf57Q5W0N0 161 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 ARHGEF18Q6ZSZ5 1173 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 PLEKHH3Q7Z736 793 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 FBXO36Q8NEA4 188 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 PCDH19Q8TAB3 1148 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 CLEC4CQ8WTT0 213 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 FAM172AQ8WUF8 416 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 GCOM2Q9BZD3 368 aaPredicted RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 NSRP1Q9H0G5 558 aaKnown RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 NKIRAS1Q9NYS0 192 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 SLC24A2Q9UI40 661 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 XPO7Q9UIA9 1087 aaKnown RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 SLC12A4Q9UP95 1085 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 TYROBPO43914 113 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 RPA3P35244 121 aaPredicted RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 HDAC4P56524 1084 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 NR1H3Q13133 447 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 STILQ15468 1287 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 SYCP2LQ5T4T6 812 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 MZB1Q8WU39 189 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 LRRN4Q8WUT4 740 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 KBTBD7Q8WVZ9 684 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 PCDH18Q9HCL0 1135 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 HAUS2Q9NVX0 235 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 SLC5A4Q9NY91 659 aa16.88■□□□□ 0.29
CTSB-203ENST00000420692 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
CTSB-203ENST00000420692 MBLAC1A4D2B0 266 aaPredicted RBP16.87■□□□□ 0.29
CTSB-203ENST00000420692 RRN3P2A6NIE6 340 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 UNCXA6NJT0 531 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 NDC80O14777 642 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 RECQL4O94761 1208 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 F2P00734 622 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 DARSP14868 501 aaKnown RBP16.87■□□□□ 0.29
CTSB-203ENST00000420692 LMO2P25791 158 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 ADAM17P78536 824 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 ROR1Q01973 937 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 MGAT5Q09328 741 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 KCNJ11Q14654 390 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 SLC1A5Q15758 541 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 BBS9Q3SYG4 887 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 SCYL2Q6P3W7 929 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 DARS2Q6PI48 645 aaKnown RBP16.87■□□□□ 0.29
CTSB-203ENST00000420692 PPP1R21Q6ZMI0 780 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 LRRC52Q8N7C0 313 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 FBF1Q8TES7 1133 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 SPOCK2Q92563 424 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 C11orf84Q9BUA3 381 aaPredicted RBP16.87■□□□□ 0.29
CTSB-203ENST00000420692 NGRNQ9NPE2 291 aaKnown RBP16.87■□□□□ 0.29
CTSB-203ENST00000420692 CNTN3Q9P232 1028 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
CTSB-203ENST00000420692 SLC18A1P54219 525 aa16.86■□□□□ 0.29
CTSB-203ENST00000420692 ATXN1P54253 815 aaKnown RBP16.86■□□□□ 0.29
CTSB-203ENST00000420692 GEMIN4P57678 1058 aaKnown RBP16.86■□□□□ 0.29
CTSB-203ENST00000420692 BASP1P80723 227 aaKnown RBP16.86■□□□□ 0.29
CTSB-203ENST00000420692 XRCC4Q13426 336 aa16.86■□□□□ 0.29
CTSB-203ENST00000420692 SGSM3Q96HU1 749 aa16.86■□□□□ 0.29
CTSB-203ENST00000420692 SNRNP25Q9BV90 132 aaKnown RBP16.86■□□□□ 0.29
CTSB-203ENST00000420692 MIS12Q9H081 205 aa16.86■□□□□ 0.29
CTSB-203ENST00000420692 ACSS3Q9H6R3 686 aa16.86■□□□□ 0.29
CTSB-203ENST00000420692 FLRT1Q9NZU1 646 aa16.86■□□□□ 0.29
CTSB-203ENST00000420692 PSMC3IPQ9P2W1 217 aaPredicted RBP16.86■□□□□ 0.29
CTSB-203ENST00000420692 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.86■□□□□ 0.29
CTSB-203ENST00000420692 PIRO00625 290 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms