RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 C2CD6Q53TS8 623 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 CYP4A22Q5TCH4 519 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 PDE12Q6L8Q7 609 aaKnown RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 DCUN1D2Q6PH85 259 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 BNIPLQ7Z465 357 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 KLHL23Q8NBE8 558 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 CENPIQ92674 756 aaPredicted RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 SLC2A13Q96QE2 648 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 GAS2L1Q99501 681 aaPredicted RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 CNPY3Q9BT09 278 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 NKX2-4Q9H2Z4 354 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 LRRC4Q9HBW1 653 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 TTC7AQ9ULT0 858 aaPredicted RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 PCDHA3Q9Y5H8 950 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 SAR1BQ9Y6B6 198 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 CDY1Q9Y6F8 540 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 NLRC5Q86WI3 1866 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 GBF1Q92538 1859 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 WDR27A2RRH5 827 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 ENDOD1O94919 500 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 VNN2O95498 520 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 ATP1A1P05023 1023 aaKnown RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 COMTP21964 271 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 CYP2F1P24903 491 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 CTNNA1P35221 906 aaKnown RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 RGS7P49802 495 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 NDUFV1P49821 464 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 PEX5P50542 639 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 TKTL1P51854 596 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 RABGGTBP53611 331 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 DAOAP59103 153 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 ERVK-21P61565 698 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 RPL10AP62906 217 aaKnown RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 RPS6KA1Q15418 735 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 DNTTIP2Q5QJE6 756 aaKnown RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 FAM102AQ5T9C2 384 aaPredicted RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 OR6B2Q6IFH4 312 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 BHLHA9Q7RTU4 235 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 POLNQ7Z5Q5 900 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 SIX6OS1Q8N1H7 587 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 PGAP3Q96FM1 320 aaPredicted RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 MCEEQ96PE7 176 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 DDX23Q9BUQ8 820 aaKnown RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 CARD9Q9H257 536 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 FBXO44Q9H4M3 255 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 NGRNQ9NPE2 291 aaKnown RBP14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 EHD2Q9NZN4 543 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 CDC23Q9UJX2 597 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 HYOU1Q9Y4L1 999 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 MYO9BQ13459 2157 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 PRUNE2Q8WUY3 3088 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 CHD7Q9P2D1 2997 aa14.96□□□□□ -0.01
SHMT1P1-201ENST00000419974 LCHNA4D1U4 455 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 F8VP50 259 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 PSTPIP1O43586 416 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZBED1O96006 694 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 OR4Q2P0C623 313 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 CPB1P15086 417 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 YWHAZP63104 245 aaKnown RBP14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 OGDHQ02218 1023 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZNF252P-AS1Q0IIN9 211 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 ADIGQ0VDE8 80 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 MESDQ14696 234 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 CLUL1Q15846 466 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 PPP2R2DQ66LE6 453 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 LLGL2Q6P1M3 1020 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 PRSS55Q6UWB4 352 aaPredicted RBP14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 RNF19BQ6ZMZ0 732 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 TCEAL8Q8IYN2 117 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 NUP93Q8N1F7 819 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 ZNF276Q8N554 614 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 SPPL3Q8TCT6 385 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 PBKQ96KB5 322 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 B3GALT6Q96L58 329 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 TTLL2Q9BWV7 592 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 PRDM12Q9H4Q4 367 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 POPDC2Q9HBU9 364 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 CHORDC1Q9UHD1 332 aaPredicted RBP14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 SCML2Q9UQR0 700 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 MRFAP1Q9Y605 127 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 PTPRDP23468 1912 aa14.95□□□□□ -0.02
SHMT1P1-201ENST00000419974 FSCN2O14926 492 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 DDX3YO15523 660 aaKnown RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 DAB1O75553 588 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 RTN3O95197 1032 aaPredicted RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 FTCDO95954 541 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 MYOGP15173 224 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 DESP17661 470 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 POU3F3P20264 500 aaPredicted RBP14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 GPD1P21695 349 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 OR1D2P34982 312 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 NOS2P35228 1153 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 GRIK1P39086 918 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 MATKP42679 507 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 SLC5A3P53794 718 aa14.94□□□□□ -0.02
SHMT1P1-201ENST00000419974 WHAMMP3Q1A5X7 153 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms