RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 WFS1O76024 890 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 LMNAP02545 664 aaKnown RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 GLI1P08151 1106 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 CNPP09543 421 aaKnown RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 LTA4HP09960 611 aaKnown RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 PGM1P36871 562 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ADCY8P40145 1251 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 MAGEA10P43363 369 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 SLC5A9Q2M3M2 681 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 LRRC24Q50LG9 513 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 RALGPS1Q5JS13 557 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 TMEM132EQ6IEE7 984 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ATF7IPQ6VMQ6 1270 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 SYNE3Q6ZMZ3 975 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 KRT74Q7RTS7 529 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 WFDC3Q8IUB2 231 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 C17orf53Q8N3J3 647 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ZBTB8BQ8NAP8 495 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 GOT1L1Q8NHS2 421 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 FAM120BQ96EK7 910 aaKnown RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 SYT3Q9BQG1 590 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ADAMTS10Q9H324 1103 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ZWILCHQ9H900 591 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 PCDHB16Q9NRJ7 776 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 LANCL2Q9NS86 450 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 DIAPH3Q9NSV4 1193 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 POLR3BQ9NW08 1133 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 LMCD1Q9NZU5 365 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 CGNQ9P2M7 1197 aaKnown RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 TMCC3Q9ULS5 477 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ADGRF5Q8IZF2 1346 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 ARHGEF28Q8N1W1 1705 aaKnown RBP5.56□□□□□ -1.52
VPS13A-207ENST00000419472 JCADQ9P266 1359 aa5.56□□□□□ -1.52
VPS13A-207ENST00000419472 UQCRHLA0A096LP55 91 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 FAM90A18PA6NE21 464 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 FAM90A16PA6NEW6 464 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 FAM90A9PA6NNJ1 464 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 FAM90A5PA8MXJ8 464 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 F9P00740 461 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 UQCRHP07919 91 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 FAM90A15PP0C7V4 464 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 FAM90A14PP0C7W9 464 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SRGAP2BP0DMP2 458 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 GAAP10253 952 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 IDEP14735 1019 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SLC6A4P31645 630 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CTXN1P60606 82 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 RPP30P78346 268 aaKnown RBP5.55□□□□□ -1.52
VPS13A-207ENST00000419472 BMP2KLQ5H9B9 411 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 UBXN11Q5T124 520 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 RINT1Q6NUQ1 792 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 TEPPQ6URK8 271 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 MED25Q71SY5 747 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CABP7Q86V35 215 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 IRF2BP1Q8IU81 584 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 YAF2Q8IY57 180 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CEP57L1Q8IYX8 460 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 MSANTD4Q8NCY6 345 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 NDST4Q9H3R1 872 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 BCO1Q9HAY6 547 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 NOD2Q9HC29 1040 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 LRRC4CQ9HCJ2 640 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 DTLQ9NZJ0 730 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 PLA2G2DQ9UNK4 145 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 C19orf53Q9UNZ5 99 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-207ENST00000419472 NUDCQ9Y266 331 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 ANKARQ7Z5J8 1434 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 J3KTA2 159 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 UBE2CO00762 179 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 TGFB1I1O43294 461 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 PHF2O75151 1096 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 ITGA10O75578 1167 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SCGB1D1O95968 90 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 GRPP07492 148 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 ARP10275 920 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SCP2P22307 547 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CLCN7P51798 805 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SLC29A2Q14542 456 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 DGKDQ16760 1214 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CRB2Q5IJ48 1285 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 PLAG1Q6DJT9 500 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SHQ1Q6PI26 577 aaKnown RBP5.55□□□□□ -1.52
VPS13A-207ENST00000419472 TMC5Q6UXY8 1006 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 IKBIPQ70UQ0 350 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 AVL9Q8NBF6 648 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CALML4Q96GE6 196 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 MED15Q96RN5 788 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 TACO1Q9BSH4 297 aaKnown RBP5.55□□□□□ -1.52
VPS13A-207ENST00000419472 PI4KBQ9UBF8 816 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SEL1LQ9UBV2 794 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SMG5Q9UPR3 1016 aaKnown RBP5.55□□□□□ -1.52
VPS13A-207ENST00000419472 SPATA31A6Q5VVP1 1343 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 C1orf167Q5SNV9 1468 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 CLEC3BP05452 202 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 HNRNPCP07910 306 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS13A-207ENST00000419472 GJB1P08034 283 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 ANXA6P08133 673 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 ZGLP1P0C6A0 271 aa5.55□□□□□ -1.52
VPS13A-207ENST00000419472 ALAS1P13196 640 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms