RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 COL6A2P12110 1019 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 EEF2P13639 858 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TUBB3Q13509 450 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 CHI3L2Q15782 390 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 ANKRD22Q5VYY1 191 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 DNAJC14Q6Y2X3 702 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM126BQ8IUX1 230 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 RAB3IL1Q8TBN0 382 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 OSBPL6Q9BZF3 934 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM98Q9Y2Y6 226 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PLLPQ9Y342 182 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PCNTO95613 3336 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 FBP2O00757 339 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 KLHL2O95198 593 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 STT3AP46977 705 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 ENTPD1P49961 510 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 CCR3P51677 355 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TCHHL1Q5QJ38 904 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 RARS2Q5T160 578 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 HPS6Q86YV9 775 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TICAM1Q8IUC6 712 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 CLEC10AQ8IUN9 316 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 C12orf56Q8IXR9 622 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 NAT8LQ8N9F0 302 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 CPT1BQ92523 772 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 SLITRK1Q96PX8 696 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM121Q9BTD3 319 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 UNC45AQ9H3U1 944 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 SUN2Q9UH99 717 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 EXOC7Q9UPT5 735 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PCDHA1Q9Y5I3 950 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 FADS3Q9Y5Q0 445 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 HEMK1Q9Y5R4 338 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TISP43B9A030 160 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 SGK1O00141 431 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 ZBTB39O15060 712 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 IFNB1P01574 187 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 INHBAP08476 426 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PDGFRBP09619 1106 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 THRAP10827 490 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF23P17027 643 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 ATF7P17544 494 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PHKA2P46019 1235 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PDAP1Q13442 181 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 C16orf72Q14CZ0 275 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 TPH2Q8IWU9 490 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 FBXW8Q8N3Y1 598 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 CATSPER1Q8NEC5 780 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 CPA5Q8WXQ8 436 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 KCNN1Q92952 543 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 COX4I2Q96KJ9 171 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 C20orf27Q9GZN8 174 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 KLHL11Q9NVR0 708 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 KCND2Q9NZV8 630 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 MYPNQ86TC9 1320 aa8.34□□□□□ -1.07
HMGXB4-202ENST00000418170 PI4K2BG5E9Z4 385 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 BTDP43251 543 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 EVA1CP58658 441 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 QRICH1Q2TAL8 776 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 C2CD6Q53TS8 623 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 DENND5BQ6ZUT9 1274 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 AMIGO2Q86SJ2 522 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 XXYLT1Q8NBI6 393 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 DHX38Q92620 1227 aaKnown RBP8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 CBWD1Q9BRT8 395 aa8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 KIAA1522Q9P206 1035 aaPredicted RBP8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 PPP1R1BQ9UD71 204 aaPredicted RBP8.34□□□□□ -1.08
HMGXB4-202ENST00000418170 LOXHD1Q8IVV2 1947 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 CCDC195A0A1B0GUA6 201 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 FBXO21O94952 628 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ACAT1P24752 427 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 CIITAP33076 1130 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 SREBF1P36956 1147 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 NUP107P57740 925 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 RPS8P62241 208 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ALCAMQ13740 583 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 TGFBIQ15582 683 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ZYXQ15942 572 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 MFSD7Q6UXD7 560 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 MON1BQ7L1V2 547 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 DEFB107AQ8IZN7 70 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 DEPTORQ8TB45 409 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 HAUS8Q9BT25 410 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 SLC2A11Q9BYW1 496 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 KLC2Q9H0B6 622 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 STN1Q9H668 368 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 CYP4F11Q9HBI6 524 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 RAB20Q9NX57 234 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 GNEQ9Y223 722 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 TCRBV9S1A1TA0A576 114 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 ADCY6O43306 1168 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 FAM189A1O60320 539 aa8.33□□□□□ -1.08
HMGXB4-202ENST00000418170 CALCAP01258 141 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms